Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
PrnpP04925 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PrnpP04925 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
PrnpP04925 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PrnpP04925 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
PrnpP04925 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
PrnpP04925 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
PrnpP04925 Gm12015-201ENSMUST00000117065 843 ntBASIC13.27□□□□□ -0.29
PrnpP04925 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.27□□□□□ -0.29
PrnpP04925 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC13.27□□□□□ -0.29
PrnpP04925 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PrnpP04925 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.27□□□□□ -0.29
PrnpP04925 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.27□□□□□ -0.29
PrnpP04925 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PrnpP04925 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PrnpP04925 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PrnpP04925 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PrnpP04925 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.27□□□□□ -0.29
PrnpP04925 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
PrnpP04925 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
PrnpP04925 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
PrnpP04925 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PrnpP04925 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
PrnpP04925 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
PrnpP04925 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PrnpP04925 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PrnpP04925 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
PrnpP04925 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PrnpP04925 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
PrnpP04925 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PrnpP04925 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
PrnpP04925 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
PrnpP04925 Gm23200-201ENSMUST00000104379 132 ntBASIC13.26□□□□□ -0.29
PrnpP04925 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
PrnpP04925 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
PrnpP04925 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PrnpP04925 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.26□□□□□ -0.29
PrnpP04925 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
PrnpP04925 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PrnpP04925 Gm13315-201ENSMUST00000120376 991 ntBASIC13.26□□□□□ -0.29
PrnpP04925 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.26□□□□□ -0.29
PrnpP04925 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PrnpP04925 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
PrnpP04925 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PrnpP04925 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PrnpP04925 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PrnpP04925 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PrnpP04925 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
PrnpP04925 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PrnpP04925 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.26□□□□□ -0.29
PrnpP04925 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.26□□□□□ -0.29
PrnpP04925 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PrnpP04925 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PrnpP04925 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PrnpP04925 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PrnpP04925 Gm10076-201ENSMUST00000073238 384 ntBASIC13.26□□□□□ -0.29
PrnpP04925 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
PrnpP04925 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PrnpP04925 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
PrnpP04925 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PrnpP04925 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
PrnpP04925 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.26□□□□□ -0.29
PrnpP04925 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
PrnpP04925 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PrnpP04925 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.25□□□□□ -0.29
PrnpP04925 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
PrnpP04925 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PrnpP04925 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
PrnpP04925 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.25□□□□□ -0.29
PrnpP04925 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
PrnpP04925 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.25□□□□□ -0.29
PrnpP04925 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
PrnpP04925 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PrnpP04925 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PrnpP04925 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
PrnpP04925 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PrnpP04925 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.25□□□□□ -0.29
PrnpP04925 Gm11331-201ENSMUST00000119764 288 ntBASIC13.25□□□□□ -0.29
PrnpP04925 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PrnpP04925 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PrnpP04925 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.25□□□□□ -0.29
PrnpP04925 Gm43947-201ENSMUST00000203019 959 ntBASIC13.25□□□□□ -0.29
PrnpP04925 Gm45598-202ENSMUST00000210719 986 ntBASIC13.25□□□□□ -0.29
PrnpP04925 Gm39404-201ENSMUST00000216350 313 ntBASIC13.25□□□□□ -0.29
PrnpP04925 Gm18730-201ENSMUST00000218038 343 ntBASIC13.25□□□□□ -0.29
PrnpP04925 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.25□□□□□ -0.29
PrnpP04925 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
PrnpP04925 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
PrnpP04925 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PrnpP04925 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PrnpP04925 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PrnpP04925 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
PrnpP04925 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
PrnpP04925 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
PrnpP04925 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
PrnpP04925 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
PrnpP04925 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PrnpP04925 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PrnpP04925 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
PrnpP04925 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms