Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxa3P02831 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxa3P02831 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxa3P02831 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Hoxa3P02831 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxa3P02831 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Hoxa3P02831 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxa3P02831 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Hoxa3P02831 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxa3P02831 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxa3P02831 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxa3P02831 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxa3P02831 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxa3P02831 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxa3P02831 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC10.79□□□□□ -0.68
Hoxa3P02831 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxa3P02831 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxa3P02831 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxa3P02831 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxa3P02831 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxa3P02831 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxa3P02831 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC10.79□□□□□ -0.68
Hoxa3P02831 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Hoxa3P02831 Gm12363-201ENSMUST00000122250 668 ntBASIC10.79□□□□□ -0.68
Hoxa3P02831 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxa3P02831 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxa3P02831 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.79□□□□□ -0.68
Hoxa3P02831 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxa3P02831 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.79□□□□□ -0.68
Hoxa3P02831 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC10.79□□□□□ -0.68
Hoxa3P02831 Gm27501-201ENSMUST00000183599 107 ntBASIC10.79□□□□□ -0.68
Hoxa3P02831 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC10.79□□□□□ -0.68
Hoxa3P02831 Gm28693-202ENSMUST00000190758 331 ntBASIC10.79□□□□□ -0.68
Hoxa3P02831 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxa3P02831 Gm4935-201ENSMUST00000221316 1198 ntBASIC10.79□□□□□ -0.68
Hoxa3P02831 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxa3P02831 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxa3P02831 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Hoxa3P02831 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxa3P02831 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Hoxa3P02831 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxa3P02831 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxa3P02831 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Hoxa3P02831 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxa3P02831 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxa3P02831 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxa3P02831 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Hoxa3P02831 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxa3P02831 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxa3P02831 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxa3P02831 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxa3P02831 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxa3P02831 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxa3P02831 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxa3P02831 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
Hoxa3P02831 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxa3P02831 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxa3P02831 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxa3P02831 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxa3P02831 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxa3P02831 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxa3P02831 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Hoxa3P02831 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxa3P02831 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Hoxa3P02831 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxa3P02831 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Hoxa3P02831 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxa3P02831 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxa3P02831 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Hoxa3P02831 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxa3P02831 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxa3P02831 Gm11591-201ENSMUST00000120063 702 ntBASIC10.78□□□□□ -0.68
Hoxa3P02831 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxa3P02831 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.78□□□□□ -0.68
Hoxa3P02831 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxa3P02831 Gm27516-201ENSMUST00000184237 98 ntBASIC10.78□□□□□ -0.68
Hoxa3P02831 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC10.78□□□□□ -0.68
Hoxa3P02831 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxa3P02831 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxa3P02831 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Hoxa3P02831 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxa3P02831 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxa3P02831 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxa3P02831 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxa3P02831 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxa3P02831 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Hoxa3P02831 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxa3P02831 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxa3P02831 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxa3P02831 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxa3P02831 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxa3P02831 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Hoxa3P02831 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxa3P02831 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxa3P02831 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxa3P02831 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxa3P02831 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxa3P02831 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Hoxa3P02831 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hoxa3P02831 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms