Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CopeO89079 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CopeO89079 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.26□□□□□ -0.29
CopeO89079 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
CopeO89079 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CopeO89079 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CopeO89079 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CopeO89079 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CopeO89079 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CopeO89079 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CopeO89079 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.25□□□□□ -0.29
CopeO89079 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CopeO89079 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CopeO89079 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CopeO89079 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CopeO89079 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CopeO89079 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CopeO89079 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CopeO89079 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CopeO89079 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.25□□□□□ -0.29
CopeO89079 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CopeO89079 Mir686-201ENSMUST00000102174 109 ntBASIC13.25□□□□□ -0.29
CopeO89079 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CopeO89079 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.25□□□□□ -0.29
CopeO89079 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.25□□□□□ -0.29
CopeO89079 Gm24694-201ENSMUST00000180054 110 ntBASIC13.25□□□□□ -0.29
CopeO89079 Gm27663-201ENSMUST00000184839 110 ntBASIC13.25□□□□□ -0.29
CopeO89079 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.25□□□□□ -0.29
CopeO89079 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.25□□□□□ -0.29
CopeO89079 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CopeO89079 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CopeO89079 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CopeO89079 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CopeO89079 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CopeO89079 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CopeO89079 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CopeO89079 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CopeO89079 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CopeO89079 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
CopeO89079 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopeO89079 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopeO89079 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopeO89079 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.24□□□□□ -0.29
CopeO89079 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CopeO89079 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopeO89079 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CopeO89079 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopeO89079 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.24□□□□□ -0.29
CopeO89079 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopeO89079 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopeO89079 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.24□□□□□ -0.29
CopeO89079 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.24□□□□□ -0.29
CopeO89079 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CopeO89079 Mir7684-201ENSMUST00000183858 60 ntBASIC13.24□□□□□ -0.29
CopeO89079 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.24□□□□□ -0.29
CopeO89079 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopeO89079 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.24□□□□□ -0.29
CopeO89079 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopeO89079 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopeO89079 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopeO89079 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopeO89079 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopeO89079 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopeO89079 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopeO89079 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.24□□□□□ -0.29
CopeO89079 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopeO89079 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopeO89079 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.24□□□□□ -0.29
CopeO89079 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CopeO89079 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopeO89079 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CopeO89079 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CopeO89079 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CopeO89079 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopeO89079 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CopeO89079 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopeO89079 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopeO89079 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopeO89079 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CopeO89079 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.23□□□□□ -0.29
CopeO89079 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopeO89079 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopeO89079 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopeO89079 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CopeO89079 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CopeO89079 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CopeO89079 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC13.23□□□□□ -0.29
CopeO89079 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CopeO89079 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopeO89079 Mir8102-201ENSMUST00000184148 139 ntBASIC13.23□□□□□ -0.29
CopeO89079 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopeO89079 Gm6458-201ENSMUST00000211573 635 ntBASIC13.23□□□□□ -0.29
CopeO89079 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.23□□□□□ -0.29
CopeO89079 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopeO89079 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopeO89079 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CopeO89079 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopeO89079 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopeO89079 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopeO89079 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms