Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CcnkO88874 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.48□□□□□ -0.57
CcnkO88874 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcnkO88874 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcnkO88874 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.48□□□□□ -0.57
CcnkO88874 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.48□□□□□ -0.57
CcnkO88874 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.48□□□□□ -0.57
CcnkO88874 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcnkO88874 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcnkO88874 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CcnkO88874 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcnkO88874 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcnkO88874 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcnkO88874 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.48□□□□□ -0.57
CcnkO88874 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcnkO88874 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcnkO88874 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcnkO88874 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.48□□□□□ -0.57
CcnkO88874 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
CcnkO88874 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcnkO88874 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CcnkO88874 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcnkO88874 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcnkO88874 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcnkO88874 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcnkO88874 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.47□□□□□ -0.57
CcnkO88874 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcnkO88874 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
CcnkO88874 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CcnkO88874 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.47□□□□□ -0.57
CcnkO88874 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.47□□□□□ -0.57
CcnkO88874 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcnkO88874 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
CcnkO88874 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcnkO88874 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.47□□□□□ -0.57
CcnkO88874 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CcnkO88874 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.47□□□□□ -0.57
CcnkO88874 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.47□□□□□ -0.57
CcnkO88874 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.47□□□□□ -0.57
CcnkO88874 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.47□□□□□ -0.57
CcnkO88874 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcnkO88874 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.47□□□□□ -0.57
CcnkO88874 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CcnkO88874 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.47□□□□□ -0.57
CcnkO88874 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcnkO88874 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcnkO88874 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcnkO88874 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcnkO88874 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcnkO88874 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcnkO88874 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcnkO88874 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcnkO88874 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CcnkO88874 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CcnkO88874 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcnkO88874 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcnkO88874 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CcnkO88874 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcnkO88874 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CcnkO88874 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
CcnkO88874 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.46□□□□□ -0.57
CcnkO88874 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.46□□□□□ -0.57
CcnkO88874 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CcnkO88874 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CcnkO88874 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
CcnkO88874 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CcnkO88874 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CcnkO88874 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
CcnkO88874 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
CcnkO88874 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
CcnkO88874 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CcnkO88874 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
CcnkO88874 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
CcnkO88874 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
CcnkO88874 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CcnkO88874 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
CcnkO88874 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
CcnkO88874 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.46□□□□□ -0.57
CcnkO88874 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CcnkO88874 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.46□□□□□ -0.57
CcnkO88874 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.46□□□□□ -0.57
CcnkO88874 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.46□□□□□ -0.57
CcnkO88874 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CcnkO88874 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CcnkO88874 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.46□□□□□ -0.57
CcnkO88874 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CcnkO88874 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.46□□□□□ -0.57
CcnkO88874 Gm9797-201ENSMUST00000052902 613 ntBASIC11.46□□□□□ -0.57
CcnkO88874 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.46□□□□□ -0.57
CcnkO88874 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CcnkO88874 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CcnkO88874 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
CcnkO88874 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.46□□□□□ -0.58
CcnkO88874 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CcnkO88874 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
CcnkO88874 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
CcnkO88874 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.58
CcnkO88874 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.46□□□□□ -0.58
CcnkO88874 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
CcnkO88874 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms