Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Efnb3O35393 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Efnb3O35393 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Efnb3O35393 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Efnb3O35393 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Efnb3O35393 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Efnb3O35393 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Efnb3O35393 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Efnb3O35393 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Efnb3O35393 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Efnb3O35393 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Efnb3O35393 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Efnb3O35393 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Efnb3O35393 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Efnb3O35393 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Efnb3O35393 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Efnb3O35393 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Efnb3O35393 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Efnb3O35393 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Efnb3O35393 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.17□□□□□ -0.78
Efnb3O35393 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Efnb3O35393 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Efnb3O35393 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Efnb3O35393 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
Efnb3O35393 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Efnb3O35393 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Efnb3O35393 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Efnb3O35393 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
Efnb3O35393 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Efnb3O35393 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Efnb3O35393 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Efnb3O35393 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Efnb3O35393 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Efnb3O35393 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Efnb3O35393 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.16□□□□□ -0.78
Efnb3O35393 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Efnb3O35393 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Efnb3O35393 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Efnb3O35393 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Efnb3O35393 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Efnb3O35393 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Efnb3O35393 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Efnb3O35393 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Efnb3O35393 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Efnb3O35393 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Efnb3O35393 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Efnb3O35393 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
Efnb3O35393 Gm4875-201ENSMUST00000118257 786 ntBASIC10.16□□□□□ -0.78
Efnb3O35393 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Efnb3O35393 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Efnb3O35393 Gm44985-201ENSMUST00000206202 1016 ntBASIC10.16□□□□□ -0.78
Efnb3O35393 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC10.16□□□□□ -0.78
Efnb3O35393 Gm7390-201ENSMUST00000212452 1216 ntBASIC10.16□□□□□ -0.78
Efnb3O35393 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Efnb3O35393 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.16□□□□□ -0.78
Efnb3O35393 Wdyhv1-203ENSMUST00000226889 394 ntBASIC10.16□□□□□ -0.78
Efnb3O35393 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Efnb3O35393 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Efnb3O35393 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Efnb3O35393 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Efnb3O35393 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Efnb3O35393 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
Efnb3O35393 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
Efnb3O35393 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Efnb3O35393 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Efnb3O35393 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Efnb3O35393 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC10.16□□□□□ -0.78
Efnb3O35393 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Efnb3O35393 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Efnb3O35393 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Efnb3O35393 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Efnb3O35393 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Efnb3O35393 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
Efnb3O35393 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Efnb3O35393 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Efnb3O35393 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Efnb3O35393 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.15□□□□□ -0.78
Efnb3O35393 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.15□□□□□ -0.78
Efnb3O35393 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Efnb3O35393 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Efnb3O35393 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Efnb3O35393 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Efnb3O35393 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Efnb3O35393 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Efnb3O35393 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Efnb3O35393 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Efnb3O35393 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.15□□□□□ -0.78
Efnb3O35393 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Efnb3O35393 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Efnb3O35393 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Efnb3O35393 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Efnb3O35393 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Efnb3O35393 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Efnb3O35393 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Efnb3O35393 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Efnb3O35393 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC10.15□□□□□ -0.78
Efnb3O35393 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC10.15□□□□□ -0.78
Efnb3O35393 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Efnb3O35393 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC10.15□□□□□ -0.78
Efnb3O35393 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms