Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Ebf3O08791 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf3O08791 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf3O08791 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf3O08791 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.37□□□□□ -0.27
Ebf3O08791 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf3O08791 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf3O08791 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf3O08791 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf3O08791 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf3O08791 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.37□□□□□ -0.27
Ebf3O08791 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ebf3O08791 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ebf3O08791 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Ebf3O08791 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.36□□□□□ -0.27
Ebf3O08791 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ebf3O08791 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.36□□□□□ -0.27
Ebf3O08791 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ebf3O08791 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ebf3O08791 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ebf3O08791 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.36□□□□□ -0.27
Ebf3O08791 Gm17208-201ENSMUST00000168388 535 ntBASIC13.36□□□□□ -0.27
Ebf3O08791 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ebf3O08791 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ebf3O08791 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Ebf3O08791 Gm37042-201ENSMUST00000193816 581 ntBASIC13.36□□□□□ -0.27
Ebf3O08791 Gm21769-201ENSMUST00000211922 111 ntBASIC13.36□□□□□ -0.27
Ebf3O08791 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.36□□□□□ -0.27
Ebf3O08791 Morn2-202ENSMUST00000227729 656 ntBASIC13.36□□□□□ -0.27
Ebf3O08791 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ebf3O08791 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ebf3O08791 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ebf3O08791 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ebf3O08791 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ebf3O08791 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.36□□□□□ -0.27
Ebf3O08791 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ebf3O08791 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
Ebf3O08791 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.36□□□□□ -0.27
Ebf3O08791 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Ebf3O08791 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Ebf3O08791 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ebf3O08791 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ebf3O08791 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ebf3O08791 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ebf3O08791 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ebf3O08791 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ebf3O08791 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ebf3O08791 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.36□□□□□ -0.27
Ebf3O08791 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ebf3O08791 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ebf3O08791 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf3O08791 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf3O08791 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ebf3O08791 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ebf3O08791 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf3O08791 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ebf3O08791 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf3O08791 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf3O08791 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.35□□□□□ -0.27
Ebf3O08791 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf3O08791 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.35□□□□□ -0.27
Ebf3O08791 Gm25668-201ENSMUST00000157700 129 ntBASIC13.35□□□□□ -0.27
Ebf3O08791 Gm24548-201ENSMUST00000158650 108 ntBASIC13.35□□□□□ -0.27
Ebf3O08791 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.35□□□□□ -0.27
Ebf3O08791 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC13.35□□□□□ -0.27
Ebf3O08791 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf3O08791 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf3O08791 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Ebf3O08791 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC13.35□□□□□ -0.27
Ebf3O08791 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Ebf3O08791 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf3O08791 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf3O08791 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf3O08791 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf3O08791 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf3O08791 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf3O08791 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf3O08791 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ebf3O08791 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.35□□□□□ -0.27
Ebf3O08791 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf3O08791 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf3O08791 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf3O08791 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf3O08791 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Ebf3O08791 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf3O08791 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ebf3O08791 Pck2-205ENSMUST00000226352 2784 ntBASIC13.34□□□□□ -0.27
Ebf3O08791 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ebf3O08791 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ebf3O08791 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf3O08791 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf3O08791 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ebf3O08791 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf3O08791 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Ebf3O08791 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Ebf3O08791 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf3O08791 Gm8738-201ENSMUST00000172606 329 ntBASIC13.34□□□□□ -0.27
Ebf3O08791 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.34□□□□□ -0.27
Ebf3O08791 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.34□□□□□ -0.27
Ebf3O08791 Gm26461-201ENSMUST00000175064 290 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms