Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim55G3X8Y1 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Trim55G3X8Y1 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim55G3X8Y1 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trim55G3X8Y1 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim55G3X8Y1 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim55G3X8Y1 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim55G3X8Y1 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim55G3X8Y1 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trim55G3X8Y1 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Trim55G3X8Y1 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Gm25911-201ENSMUST00000157621 56 ntBASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim55G3X8Y1 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim55G3X8Y1 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim55G3X8Y1 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim55G3X8Y1 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim55G3X8Y1 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim55G3X8Y1 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.17□□□□□ -0.3
Trim55G3X8Y1 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.17□□□□□ -0.3
Trim55G3X8Y1 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim55G3X8Y1 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim55G3X8Y1 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim55G3X8Y1 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim55G3X8Y1 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim55G3X8Y1 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim55G3X8Y1 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.17□□□□□ -0.3
Trim55G3X8Y1 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim55G3X8Y1 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.17□□□□□ -0.3
Trim55G3X8Y1 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim55G3X8Y1 Gm16198-201ENSMUST00000118766 670 ntBASIC13.17□□□□□ -0.3
Trim55G3X8Y1 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim55G3X8Y1 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim55G3X8Y1 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trim55G3X8Y1 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.17□□□□□ -0.3
Trim55G3X8Y1 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim55G3X8Y1 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.17□□□□□ -0.3
Trim55G3X8Y1 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.17□□□□□ -0.3
Trim55G3X8Y1 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.17□□□□□ -0.3
Trim55G3X8Y1 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim55G3X8Y1 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim55G3X8Y1 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim55G3X8Y1 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trim55G3X8Y1 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim55G3X8Y1 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim55G3X8Y1 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim55G3X8Y1 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim55G3X8Y1 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim55G3X8Y1 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim55G3X8Y1 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim55G3X8Y1 Gm2128-201ENSMUST00000108009 2560 ntBASIC13.17□□□□□ -0.3
Trim55G3X8Y1 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim55G3X8Y1 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms