Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh11xF6ZNL5 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh11xF6ZNL5 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.21□□□□□ -0.14
Pcdh11xF6ZNL5 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Pcdh11xF6ZNL5 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh11xF6ZNL5 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh11xF6ZNL5 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Pcdh11xF6ZNL5 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.21□□□□□ -0.14
Pcdh11xF6ZNL5 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pcdh11xF6ZNL5 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh11xF6ZNL5 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh11xF6ZNL5 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh11xF6ZNL5 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh11xF6ZNL5 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdh11xF6ZNL5 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC14.2□□□□□ -0.14
Pcdh11xF6ZNL5 Gm37424-201ENSMUST00000191727 561 ntBASIC14.2□□□□□ -0.14
Pcdh11xF6ZNL5 Gm43818-201ENSMUST00000200605 466 ntBASIC14.2□□□□□ -0.14
Pcdh11xF6ZNL5 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh11xF6ZNL5 Gm32025-201ENSMUST00000217960 307 ntBASIC14.2□□□□□ -0.14
Pcdh11xF6ZNL5 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.2□□□□□ -0.14
Pcdh11xF6ZNL5 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh11xF6ZNL5 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh11xF6ZNL5 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh11xF6ZNL5 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh11xF6ZNL5 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pcdh11xF6ZNL5 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh11xF6ZNL5 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh11xF6ZNL5 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh11xF6ZNL5 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh11xF6ZNL5 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh11xF6ZNL5 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdh11xF6ZNL5 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh11xF6ZNL5 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh11xF6ZNL5 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh11xF6ZNL5 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Pcdh11xF6ZNL5 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdh11xF6ZNL5 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pcdh11xF6ZNL5 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh11xF6ZNL5 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh11xF6ZNL5 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh11xF6ZNL5 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh11xF6ZNL5 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh11xF6ZNL5 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh11xF6ZNL5 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14.19□□□□□ -0.14
Pcdh11xF6ZNL5 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Pcdh11xF6ZNL5 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh11xF6ZNL5 Gm17208-201ENSMUST00000168388 535 ntBASIC14.19□□□□□ -0.14
Pcdh11xF6ZNL5 Gm7029-201ENSMUST00000173226 450 ntBASIC14.19□□□□□ -0.14
Pcdh11xF6ZNL5 Gm23363-201ENSMUST00000175024 79 ntBASIC14.19□□□□□ -0.14
Pcdh11xF6ZNL5 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.19□□□□□ -0.14
Pcdh11xF6ZNL5 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdh11xF6ZNL5 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh11xF6ZNL5 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh11xF6ZNL5 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh11xF6ZNL5 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh11xF6ZNL5 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh11xF6ZNL5 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh11xF6ZNL5 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh11xF6ZNL5 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Pcdh11xF6ZNL5 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh11xF6ZNL5 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh11xF6ZNL5 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh11xF6ZNL5 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh11xF6ZNL5 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.19□□□□□ -0.14
Pcdh11xF6ZNL5 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pcdh11xF6ZNL5 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh11xF6ZNL5 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh11xF6ZNL5 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh11xF6ZNL5 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh11xF6ZNL5 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh11xF6ZNL5 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh11xF6ZNL5 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdh11xF6ZNL5 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh11xF6ZNL5 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh11xF6ZNL5 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh11xF6ZNL5 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh11xF6ZNL5 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh11xF6ZNL5 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh11xF6ZNL5 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Pcdh11xF6ZNL5 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.18□□□□□ -0.14
Pcdh11xF6ZNL5 Gm12363-201ENSMUST00000122250 668 ntBASIC14.18□□□□□ -0.14
Pcdh11xF6ZNL5 Gm17420-201ENSMUST00000164753 153 ntBASIC14.18□□□□□ -0.14
Pcdh11xF6ZNL5 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdh11xF6ZNL5 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh11xF6ZNL5 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.18□□□□□ -0.14
Pcdh11xF6ZNL5 Gm26035-201ENSMUST00000083065 308 ntBASIC14.18□□□□□ -0.14
Pcdh11xF6ZNL5 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh11xF6ZNL5 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh11xF6ZNL5 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh11xF6ZNL5 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh11xF6ZNL5 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh11xF6ZNL5 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh11xF6ZNL5 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
Pcdh11xF6ZNL5 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh11xF6ZNL5 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh11xF6ZNL5 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdh11xF6ZNL5 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh11xF6ZNL5 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh11xF6ZNL5 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Pcdh11xF6ZNL5 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms