Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc85cE9Q6B2 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc85cE9Q6B2 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc85cE9Q6B2 Gm26448-201ENSMUST00000082446 203 ntBASIC15.72■□□□□ 0.11
Ccdc85cE9Q6B2 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc85cE9Q6B2 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ccdc85cE9Q6B2 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc85cE9Q6B2 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Ccdc85cE9Q6B2 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc85cE9Q6B2 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc85cE9Q6B2 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc85cE9Q6B2 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Ccdc85cE9Q6B2 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc85cE9Q6B2 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc85cE9Q6B2 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc85cE9Q6B2 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc85cE9Q6B2 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Ccdc85cE9Q6B2 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Ccdc85cE9Q6B2 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc85cE9Q6B2 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC15.71■□□□□ 0.11
Ccdc85cE9Q6B2 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC15.71■□□□□ 0.11
Ccdc85cE9Q6B2 Gm25604-201ENSMUST00000158359 133 ntBASIC15.71■□□□□ 0.11
Ccdc85cE9Q6B2 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc85cE9Q6B2 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC15.71■□□□□ 0.11
Ccdc85cE9Q6B2 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC15.71■□□□□ 0.11
Ccdc85cE9Q6B2 AC165260.3-202ENSMUST00000224550 1031 ntBASIC15.71■□□□□ 0.11
Ccdc85cE9Q6B2 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc85cE9Q6B2 Mir339-201ENSMUST00000083659 96 ntBASIC15.71■□□□□ 0.11
Ccdc85cE9Q6B2 Gm10288-201ENSMUST00000084614 537 ntBASIC15.71■□□□□ 0.11
Ccdc85cE9Q6B2 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc85cE9Q6B2 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc85cE9Q6B2 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc85cE9Q6B2 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.71■□□□□ 0.11
Ccdc85cE9Q6B2 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc85cE9Q6B2 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Ccdc85cE9Q6B2 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ccdc85cE9Q6B2 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Ccdc85cE9Q6B2 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ccdc85cE9Q6B2 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Ccdc85cE9Q6B2 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ccdc85cE9Q6B2 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc85cE9Q6B2 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc85cE9Q6B2 Gm42941-201ENSMUST00000200347 1321 ntBASIC15.7■□□□□ 0.1
Ccdc85cE9Q6B2 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
Ccdc85cE9Q6B2 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc85cE9Q6B2 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
Ccdc85cE9Q6B2 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Ccdc85cE9Q6B2 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc85cE9Q6B2 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc85cE9Q6B2 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc85cE9Q6B2 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Ccdc85cE9Q6B2 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Ccdc85cE9Q6B2 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc85cE9Q6B2 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc85cE9Q6B2 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ccdc85cE9Q6B2 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Ccdc85cE9Q6B2 Gm14219-201ENSMUST00000120414 288 ntBASIC15.7■□□□□ 0.1
Ccdc85cE9Q6B2 Gm8199-201ENSMUST00000121323 823 ntBASIC15.7■□□□□ 0.1
Ccdc85cE9Q6B2 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC15.7■□□□□ 0.1
Ccdc85cE9Q6B2 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc85cE9Q6B2 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc85cE9Q6B2 Gm8100-201ENSMUST00000182906 988 ntBASIC15.7■□□□□ 0.1
Ccdc85cE9Q6B2 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC15.7■□□□□ 0.1
Ccdc85cE9Q6B2 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ccdc85cE9Q6B2 Gm6430-201ENSMUST00000054664 1248 ntBASIC15.7■□□□□ 0.1
Ccdc85cE9Q6B2 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc85cE9Q6B2 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc85cE9Q6B2 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc85cE9Q6B2 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc85cE9Q6B2 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc85cE9Q6B2 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.7■□□□□ 0.1
Ccdc85cE9Q6B2 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Ccdc85cE9Q6B2 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Ccdc85cE9Q6B2 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc85cE9Q6B2 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc85cE9Q6B2 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc85cE9Q6B2 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc85cE9Q6B2 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc85cE9Q6B2 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ccdc85cE9Q6B2 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc85cE9Q6B2 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc85cE9Q6B2 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc85cE9Q6B2 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc85cE9Q6B2 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc85cE9Q6B2 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.69■□□□□ 0.1
Ccdc85cE9Q6B2 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc85cE9Q6B2 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC15.69■□□□□ 0.1
Ccdc85cE9Q6B2 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC15.69■□□□□ 0.1
Ccdc85cE9Q6B2 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Ccdc85cE9Q6B2 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.69■□□□□ 0.1
Ccdc85cE9Q6B2 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc85cE9Q6B2 Gm42937-201ENSMUST00000197360 752 ntBASIC15.69■□□□□ 0.1
Ccdc85cE9Q6B2 Gm43520-201ENSMUST00000197996 164 ntBASIC15.69■□□□□ 0.1
Ccdc85cE9Q6B2 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc85cE9Q6B2 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC15.69■□□□□ 0.1
Ccdc85cE9Q6B2 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC15.69■□□□□ 0.1
Ccdc85cE9Q6B2 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc85cE9Q6B2 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ccdc85cE9Q6B2 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ccdc85cE9Q6B2 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms