Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Scaf11E9PZM7 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Gm43520-201ENSMUST00000197996 164 ntBASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Gm44552-201ENSMUST00000205458 1247 ntBASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Gm9139-201ENSMUST00000218817 700 ntBASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Gm30238-201ENSMUST00000195528 2603 ntBASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scaf11E9PZM7 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scaf11E9PZM7 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Gm3332-201ENSMUST00000189337 928 ntBASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Gm7395-201ENSMUST00000216059 1045 ntBASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Gm807-202ENSMUST00000224929 408 ntBASIC17.63■□□□□ 0.41
Scaf11E9PZM7 AC169036.1-201ENSMUST00000227994 296 ntBASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Mirlet7i-201ENSMUST00000083472 85 ntBASIC17.63■□□□□ 0.41
Scaf11E9PZM7 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scaf11E9PZM7 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scaf11E9PZM7 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scaf11E9PZM7 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scaf11E9PZM7 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Scaf11E9PZM7 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scaf11E9PZM7 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC17.62■□□□□ 0.41
Scaf11E9PZM7 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scaf11E9PZM7 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scaf11E9PZM7 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scaf11E9PZM7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scaf11E9PZM7 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scaf11E9PZM7 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Scaf11E9PZM7 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Scaf11E9PZM7 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scaf11E9PZM7 Gm4726-201ENSMUST00000135604 736 ntBASIC17.62■□□□□ 0.41
Scaf11E9PZM7 Gm6019-201ENSMUST00000148369 736 ntBASIC17.62■□□□□ 0.41
Scaf11E9PZM7 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scaf11E9PZM7 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC17.62■□□□□ 0.41
Scaf11E9PZM7 Gm42518-201ENSMUST00000196277 938 ntBASIC17.62■□□□□ 0.41
Scaf11E9PZM7 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scaf11E9PZM7 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scaf11E9PZM7 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scaf11E9PZM7 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scaf11E9PZM7 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scaf11E9PZM7 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scaf11E9PZM7 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scaf11E9PZM7 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scaf11E9PZM7 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scaf11E9PZM7 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scaf11E9PZM7 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scaf11E9PZM7 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Scaf11E9PZM7 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scaf11E9PZM7 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scaf11E9PZM7 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scaf11E9PZM7 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scaf11E9PZM7 Gm5989-201ENSMUST00000096092 2077 ntBASIC17.61■□□□□ 0.41
Scaf11E9PZM7 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Scaf11E9PZM7 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scaf11E9PZM7 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scaf11E9PZM7 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scaf11E9PZM7 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scaf11E9PZM7 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scaf11E9PZM7 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scaf11E9PZM7 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC17.61■□□□□ 0.41
Scaf11E9PZM7 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scaf11E9PZM7 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scaf11E9PZM7 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scaf11E9PZM7 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scaf11E9PZM7 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scaf11E9PZM7 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scaf11E9PZM7 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Scaf11E9PZM7 Gm14585-201ENSMUST00000120713 634 ntBASIC17.61■□□□□ 0.41
Scaf11E9PZM7 Gm15595-201ENSMUST00000120840 961 ntBASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms