Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.68□□□□□ -0.38
Srp54bE9PXC0 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.68□□□□□ -0.38
Srp54bE9PXC0 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Gm13492-201ENSMUST00000119772 665 ntBASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.67□□□□□ -0.38
Srp54bE9PXC0 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Srp54bE9PXC0 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.66□□□□□ -0.38
Srp54bE9PXC0 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.66□□□□□ -0.38
Srp54bE9PXC0 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Gm31256-201ENSMUST00000194705 506 ntBASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Srp54bE9PXC0 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms