Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a3E9PWQ3 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Gm12314-201ENSMUST00000118104 538 ntBASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Mir432-201ENSMUST00000157230 75 ntBASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Gm18367-201ENSMUST00000176139 600 ntBASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Gm18294-201ENSMUST00000176980 1748 ntBASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Gm3635-201ENSMUST00000212314 354 ntBASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Wbp1-209ENSMUST00000205023 716 ntBASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a3E9PWQ3 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col6a3E9PWQ3 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col6a3E9PWQ3 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Col6a3E9PWQ3 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col6a3E9PWQ3 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col6a3E9PWQ3 Gm23439-201ENSMUST00000104292 132 ntBASIC12.46□□□□□ -0.41
Col6a3E9PWQ3 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col6a3E9PWQ3 Gm24328-201ENSMUST00000175104 67 ntBASIC12.46□□□□□ -0.41
Col6a3E9PWQ3 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC12.46□□□□□ -0.41
Col6a3E9PWQ3 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.46□□□□□ -0.41
Col6a3E9PWQ3 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col6a3E9PWQ3 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col6a3E9PWQ3 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col6a3E9PWQ3 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col6a3E9PWQ3 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col6a3E9PWQ3 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col6a3E9PWQ3 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col6a3E9PWQ3 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Col6a3E9PWQ3 Gm13981-201ENSMUST00000122360 447 ntBASIC12.46□□□□□ -0.42
Col6a3E9PWQ3 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col6a3E9PWQ3 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Col6a3E9PWQ3 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Col6a3E9PWQ3 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col6a3E9PWQ3 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col6a3E9PWQ3 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Col6a3E9PWQ3 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col6a3E9PWQ3 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col6a3E9PWQ3 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col6a3E9PWQ3 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col6a3E9PWQ3 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Col6a3E9PWQ3 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Col6a3E9PWQ3 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Col6a3E9PWQ3 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col6a3E9PWQ3 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 Gm13315-201ENSMUST00000120376 991 ntBASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 Gm26134-201ENSMUST00000178484 110 ntBASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms