Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tmf1B9EKI3 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tmf1B9EKI3 Gm7789-202ENSMUST00000211273 1400 ntBASIC17.38■□□□□ 0.37
Tmf1B9EKI3 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tmf1B9EKI3 Gm3052-202ENSMUST00000188254 2224 ntBASIC17.37■□□□□ 0.37
Tmf1B9EKI3 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tmf1B9EKI3 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC17.37■□□□□ 0.37
Tmf1B9EKI3 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tmf1B9EKI3 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Tmf1B9EKI3 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tmf1B9EKI3 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tmf1B9EKI3 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tmf1B9EKI3 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tmf1B9EKI3 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Tmf1B9EKI3 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tmf1B9EKI3 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tmf1B9EKI3 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tmf1B9EKI3 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tmf1B9EKI3 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tmf1B9EKI3 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tmf1B9EKI3 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tmf1B9EKI3 Gm7783-201ENSMUST00000204795 781 ntBASIC17.37■□□□□ 0.37
Tmf1B9EKI3 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC17.37■□□□□ 0.37
Tmf1B9EKI3 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Tmf1B9EKI3 Gm10608-202ENSMUST00000213924 676 ntBASIC17.37■□□□□ 0.37
Tmf1B9EKI3 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tmf1B9EKI3 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tmf1B9EKI3 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tmf1B9EKI3 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tmf1B9EKI3 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tmf1B9EKI3 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC17.37■□□□□ 0.37
Tmf1B9EKI3 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tmf1B9EKI3 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tmf1B9EKI3 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tmf1B9EKI3 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Tmf1B9EKI3 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Tmf1B9EKI3 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC17.37■□□□□ 0.37
Tmf1B9EKI3 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Tmf1B9EKI3 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Tmf1B9EKI3 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tmf1B9EKI3 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC17.36■□□□□ 0.37
Tmf1B9EKI3 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tmf1B9EKI3 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
Tmf1B9EKI3 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Tmf1B9EKI3 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tmf1B9EKI3 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tmf1B9EKI3 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tmf1B9EKI3 Gm13297-201ENSMUST00000120205 934 ntBASIC17.36■□□□□ 0.37
Tmf1B9EKI3 Gm11964-201ENSMUST00000120982 444 ntBASIC17.36■□□□□ 0.37
Tmf1B9EKI3 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC17.36■□□□□ 0.37
Tmf1B9EKI3 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tmf1B9EKI3 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tmf1B9EKI3 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
Tmf1B9EKI3 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Tmf1B9EKI3 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tmf1B9EKI3 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tmf1B9EKI3 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tmf1B9EKI3 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tmf1B9EKI3 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tmf1B9EKI3 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tmf1B9EKI3 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tmf1B9EKI3 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tmf1B9EKI3 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tmf1B9EKI3 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tmf1B9EKI3 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tmf1B9EKI3 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tmf1B9EKI3 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tmf1B9EKI3 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tmf1B9EKI3 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tmf1B9EKI3 Gm5638-201ENSMUST00000118618 1258 ntBASIC17.35■□□□□ 0.37
Tmf1B9EKI3 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC17.35■□□□□ 0.37
Tmf1B9EKI3 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC17.35■□□□□ 0.37
Tmf1B9EKI3 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tmf1B9EKI3 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Tmf1B9EKI3 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tmf1B9EKI3 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tmf1B9EKI3 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tmf1B9EKI3 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tmf1B9EKI3 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tmf1B9EKI3 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
Tmf1B9EKI3 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tmf1B9EKI3 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tmf1B9EKI3 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tmf1B9EKI3 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tmf1B9EKI3 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tmf1B9EKI3 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tmf1B9EKI3 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tmf1B9EKI3 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tmf1B9EKI3 Gm10434-201ENSMUST00000101158 471 ntBASIC17.34■□□□□ 0.37
Tmf1B9EKI3 Gm15370-201ENSMUST00000117158 253 ntBASIC17.34■□□□□ 0.37
Tmf1B9EKI3 Gm4986-201ENSMUST00000119731 549 ntBASIC17.34■□□□□ 0.37
Tmf1B9EKI3 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Tmf1B9EKI3 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tmf1B9EKI3 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Tmf1B9EKI3 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Tmf1B9EKI3 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Tmf1B9EKI3 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC17.34■□□□□ 0.37
Tmf1B9EKI3 Gm37489-201ENSMUST00000191883 159 ntBASIC17.34■□□□□ 0.37
Tmf1B9EKI3 Gm37644-201ENSMUST00000192190 2270 ntBASIC17.34■□□□□ 0.37
Tmf1B9EKI3 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms