Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Mbnl2-204ENSMUST00000227012 2390 ntBASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm12887B1AVM1 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Gm8617-201ENSMUST00000118796 2222 ntBASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm12887B1AVM1 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Gm6415-201ENSMUST00000118488 348 ntBASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Gm43474-201ENSMUST00000196415 774 ntBASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Gm5779-201ENSMUST00000218467 910 ntBASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.38□□□□□ -0.75
Gm12887B1AVM1 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Gm29608-201ENSMUST00000190444 463 ntBASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Gm38144-201ENSMUST00000192790 465 ntBASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Gm44335-201ENSMUST00000196879 141 ntBASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Gm44297-201ENSMUST00000198304 141 ntBASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Gm44346-201ENSMUST00000198851 141 ntBASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Gm24447-201ENSMUST00000083977 338 ntBASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms