Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chd3B1AR17 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chd3B1AR17 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd3B1AR17 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd3B1AR17 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Chd3B1AR17 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd3B1AR17 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd3B1AR17 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd3B1AR17 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chd3B1AR17 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.57□□□□□ -0.4
Chd3B1AR17 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd3B1AR17 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd3B1AR17 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd3B1AR17 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.57□□□□□ -0.4
Chd3B1AR17 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd3B1AR17 Gm26956-201ENSMUST00000182176 986 ntBASIC12.57□□□□□ -0.4
Chd3B1AR17 Gm7593-201ENSMUST00000187246 644 ntBASIC12.57□□□□□ -0.4
Chd3B1AR17 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.57□□□□□ -0.4
Chd3B1AR17 Gm6082-201ENSMUST00000215204 454 ntBASIC12.57□□□□□ -0.4
Chd3B1AR17 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.57□□□□□ -0.4
Chd3B1AR17 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd3B1AR17 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd3B1AR17 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd3B1AR17 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd3B1AR17 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd3B1AR17 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd3B1AR17 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Chd3B1AR17 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd3B1AR17 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.57□□□□□ -0.4
Chd3B1AR17 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Chd3B1AR17 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.57□□□□□ -0.4
Chd3B1AR17 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Chd3B1AR17 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd3B1AR17 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.57□□□□□ -0.4
Chd3B1AR17 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd3B1AR17 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd3B1AR17 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd3B1AR17 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.57□□□□□ -0.4
Chd3B1AR17 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd3B1AR17 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd3B1AR17 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd3B1AR17 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chd3B1AR17 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chd3B1AR17 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.57□□□□□ -0.4
Chd3B1AR17 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.57□□□□□ -0.4
Chd3B1AR17 Gm5904-201ENSMUST00000210286 865 ntBASIC12.57□□□□□ -0.4
Chd3B1AR17 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.57□□□□□ -0.4
Chd3B1AR17 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd3B1AR17 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd3B1AR17 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Chd3B1AR17 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd3B1AR17 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd3B1AR17 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd3B1AR17 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Chd3B1AR17 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd3B1AR17 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd3B1AR17 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd3B1AR17 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chd3B1AR17 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Chd3B1AR17 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Chd3B1AR17 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd3B1AR17 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chd3B1AR17 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd3B1AR17 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.56□□□□□ -0.4
Chd3B1AR17 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Chd3B1AR17 Gm17376-201ENSMUST00000166016 84 ntBASIC12.56□□□□□ -0.4
Chd3B1AR17 Gm8018-201ENSMUST00000173536 789 ntBASIC12.56□□□□□ -0.4
Chd3B1AR17 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd3B1AR17 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd3B1AR17 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chd3B1AR17 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd3B1AR17 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.56□□□□□ -0.4
Chd3B1AR17 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd3B1AR17 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd3B1AR17 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd3B1AR17 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.56□□□□□ -0.4
Chd3B1AR17 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chd3B1AR17 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd3B1AR17 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd3B1AR17 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chd3B1AR17 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd3B1AR17 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.55□□□□□ -0.4
Chd3B1AR17 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd3B1AR17 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd3B1AR17 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Chd3B1AR17 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chd3B1AR17 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.55□□□□□ -0.4
Chd3B1AR17 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chd3B1AR17 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chd3B1AR17 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd3B1AR17 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.55□□□□□ -0.4
Chd3B1AR17 Gm8885-201ENSMUST00000189382 598 ntBASIC12.55□□□□□ -0.4
Chd3B1AR17 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Chd3B1AR17 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.55□□□□□ -0.4
Chd3B1AR17 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd3B1AR17 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd3B1AR17 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd3B1AR17 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chd3B1AR17 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd3B1AR17 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms