Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Scn3aA2ASI5 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC14.21□□□□□ -0.14
Scn3aA2ASI5 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Scn3aA2ASI5 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scn3aA2ASI5 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC14.21□□□□□ -0.14
Scn3aA2ASI5 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC14.21□□□□□ -0.14
Scn3aA2ASI5 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Scn3aA2ASI5 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scn3aA2ASI5 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scn3aA2ASI5 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scn3aA2ASI5 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scn3aA2ASI5 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scn3aA2ASI5 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scn3aA2ASI5 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn3aA2ASI5 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn3aA2ASI5 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scn3aA2ASI5 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn3aA2ASI5 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn3aA2ASI5 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn3aA2ASI5 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scn3aA2ASI5 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn3aA2ASI5 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Scn3aA2ASI5 Acot6-202ENSMUST00000222921 3622 ntBASIC14.2□□□□□ -0.14
Scn3aA2ASI5 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn3aA2ASI5 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn3aA2ASI5 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC14.2□□□□□ -0.14
Scn3aA2ASI5 Gm28882-201ENSMUST00000185504 314 ntBASIC14.2□□□□□ -0.14
Scn3aA2ASI5 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC14.2□□□□□ -0.14
Scn3aA2ASI5 Abhd11os-203ENSMUST00000222613 363 ntBASIC14.2□□□□□ -0.14
Scn3aA2ASI5 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.2□□□□□ -0.14
Scn3aA2ASI5 AC159205.5-202ENSMUST00000224849 386 ntBASIC14.2□□□□□ -0.14
Scn3aA2ASI5 Gm9996-201ENSMUST00000070359 913 ntBASIC14.2□□□□□ -0.14
Scn3aA2ASI5 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn3aA2ASI5 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.2□□□□□ -0.14
Scn3aA2ASI5 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scn3aA2ASI5 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scn3aA2ASI5 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn3aA2ASI5 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Scn3aA2ASI5 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scn3aA2ASI5 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Scn3aA2ASI5 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn3aA2ASI5 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn3aA2ASI5 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn3aA2ASI5 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.19□□□□□ -0.14
Scn3aA2ASI5 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3aA2ASI5 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3aA2ASI5 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3aA2ASI5 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3aA2ASI5 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3aA2ASI5 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.19□□□□□ -0.14
Scn3aA2ASI5 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3aA2ASI5 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3aA2ASI5 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3aA2ASI5 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3aA2ASI5 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Scn3aA2ASI5 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3aA2ASI5 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3aA2ASI5 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3aA2ASI5 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Scn3aA2ASI5 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.19□□□□□ -0.14
Scn3aA2ASI5 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.19□□□□□ -0.14
Scn3aA2ASI5 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3aA2ASI5 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3aA2ASI5 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3aA2ASI5 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3aA2ASI5 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Scn3aA2ASI5 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3aA2ASI5 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3aA2ASI5 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3aA2ASI5 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.19□□□□□ -0.14
Scn3aA2ASI5 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3aA2ASI5 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3aA2ASI5 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3aA2ASI5 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3aA2ASI5 Gm7003-201ENSMUST00000195089 312 ntBASIC14.19□□□□□ -0.14
Scn3aA2ASI5 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.19□□□□□ -0.14
Scn3aA2ASI5 Gm10371-202ENSMUST00000228010 1081 ntBASIC14.19□□□□□ -0.14
Scn3aA2ASI5 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3aA2ASI5 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3aA2ASI5 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3aA2ASI5 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3aA2ASI5 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Scn3aA2ASI5 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3aA2ASI5 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn3aA2ASI5 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3aA2ASI5 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3aA2ASI5 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3aA2ASI5 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.18□□□□□ -0.14
Scn3aA2ASI5 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3aA2ASI5 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Scn3aA2ASI5 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC14.18□□□□□ -0.14
Scn3aA2ASI5 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3aA2ASI5 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Scn3aA2ASI5 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC14.18□□□□□ -0.14
Scn3aA2ASI5 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3aA2ASI5 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3aA2ASI5 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Scn3aA2ASI5 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.18□□□□□ -0.14
Scn3aA2ASI5 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn3aA2ASI5 Gm45433-201ENSMUST00000209386 247 ntBASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms