Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Scn1aA2APX8 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Scn1aA2APX8 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn1aA2APX8 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.39□□□□□ -0.27
Scn1aA2APX8 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn1aA2APX8 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Scn1aA2APX8 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Scn1aA2APX8 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Scn1aA2APX8 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Scn1aA2APX8 Gm26956-201ENSMUST00000182176 986 ntBASIC13.39□□□□□ -0.27
Scn1aA2APX8 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.39□□□□□ -0.27
Scn1aA2APX8 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.39□□□□□ -0.27
Scn1aA2APX8 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Scn1aA2APX8 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn1aA2APX8 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Scn1aA2APX8 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn1aA2APX8 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Scn1aA2APX8 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Scn1aA2APX8 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn1aA2APX8 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn1aA2APX8 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Scn1aA2APX8 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn1aA2APX8 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Scn1aA2APX8 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.39□□□□□ -0.27
Scn1aA2APX8 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn1aA2APX8 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn1aA2APX8 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn1aA2APX8 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn1aA2APX8 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Scn1aA2APX8 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn1aA2APX8 Gm24255-201ENSMUST00000104481 128 ntBASIC13.39□□□□□ -0.27
Scn1aA2APX8 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
Scn1aA2APX8 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.39□□□□□ -0.27
Scn1aA2APX8 Gm12314-201ENSMUST00000118104 538 ntBASIC13.39□□□□□ -0.27
Scn1aA2APX8 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Scn1aA2APX8 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Scn1aA2APX8 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.39□□□□□ -0.27
Scn1aA2APX8 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.39□□□□□ -0.27
Scn1aA2APX8 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.39□□□□□ -0.27
Scn1aA2APX8 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Scn1aA2APX8 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.39□□□□□ -0.27
Scn1aA2APX8 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn1aA2APX8 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn1aA2APX8 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn1aA2APX8 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Scn1aA2APX8 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn1aA2APX8 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn1aA2APX8 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn1aA2APX8 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn1aA2APX8 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn1aA2APX8 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn1aA2APX8 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn1aA2APX8 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.38□□□□□ -0.27
Scn1aA2APX8 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn1aA2APX8 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Scn1aA2APX8 Gm13570-201ENSMUST00000140763 309 ntBASIC13.38□□□□□ -0.27
Scn1aA2APX8 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC13.38□□□□□ -0.27
Scn1aA2APX8 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.38□□□□□ -0.27
Scn1aA2APX8 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Scn1aA2APX8 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.38□□□□□ -0.27
Scn1aA2APX8 Gm27243-201ENSMUST00000183964 521 ntBASIC13.38□□□□□ -0.27
Scn1aA2APX8 Gm6082-201ENSMUST00000215204 454 ntBASIC13.38□□□□□ -0.27
Scn1aA2APX8 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn1aA2APX8 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn1aA2APX8 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Scn1aA2APX8 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn1aA2APX8 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn1aA2APX8 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn1aA2APX8 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn1aA2APX8 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn1aA2APX8 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn1aA2APX8 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Scn1aA2APX8 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn1aA2APX8 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Scn1aA2APX8 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn1aA2APX8 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn1aA2APX8 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn1aA2APX8 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Scn1aA2APX8 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.38□□□□□ -0.27
Scn1aA2APX8 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn1aA2APX8 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Scn1aA2APX8 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scn1aA2APX8 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn1aA2APX8 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn1aA2APX8 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn1aA2APX8 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn1aA2APX8 Gm14109-201ENSMUST00000118814 309 ntBASIC13.37□□□□□ -0.27
Scn1aA2APX8 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scn1aA2APX8 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scn1aA2APX8 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Scn1aA2APX8 Gm20482-202ENSMUST00000174729 825 ntBASIC13.37□□□□□ -0.27
Scn1aA2APX8 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.37□□□□□ -0.27
Scn1aA2APX8 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn1aA2APX8 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn1aA2APX8 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scn1aA2APX8 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn1aA2APX8 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn1aA2APX8 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn1aA2APX8 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scn1aA2APX8 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms