Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Ubr4A2AN08 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Ubr4A2AN08 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Ubr4A2AN08 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.36
Ubr4A2AN08 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Clec4n-202ENSMUST00000112554 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Gm24809-201ENSMUST00000175318 271 ntBASIC6.58□□□□□ -1.36
Ubr4A2AN08 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Gm4891-201ENSMUST00000182279 912 ntBASIC6.58□□□□□ -1.36
Ubr4A2AN08 AI506816-201ENSMUST00000197153 474 ntTSL 5 BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Clec4n-206ENSMUST00000205129 363 ntTSL 5 BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 AC102312.1-202ENSMUST00000218600 851 ntTSL 2 BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC6.58□□□□□ -1.36
Ubr4A2AN08 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Snx10-202ENSMUST00000114439 968 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Gm12579-201ENSMUST00000118040 783 ntBASIC6.58□□□□□ -1.36
Ubr4A2AN08 Gm11882-201ENSMUST00000121463 506 ntBASIC6.58□□□□□ -1.36
Ubr4A2AN08 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC6.58□□□□□ -1.36
Ubr4A2AN08 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Gm10120-201ENSMUST00000219845 357 ntBASIC6.58□□□□□ -1.36
Ubr4A2AN08 AC125209.1-201ENSMUST00000225812 766 ntBASIC6.58□□□□□ -1.36
Ubr4A2AN08 Gm5449-201ENSMUST00000081132 357 ntBASIC6.58□□□□□ -1.36
Ubr4A2AN08 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Gm21759-201ENSMUST00000178345 1828 ntBASIC6.58□□□□□ -1.36
Ubr4A2AN08 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC6.58□□□□□ -1.36
Ubr4A2AN08 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Gm11509-201ENSMUST00000117358 325 ntBASIC6.58□□□□□ -1.36
Ubr4A2AN08 Gm16329-201ENSMUST00000148174 371 ntBASIC6.58□□□□□ -1.36
Ubr4A2AN08 Gm8584-201ENSMUST00000171982 758 ntBASIC6.58□□□□□ -1.36
Ubr4A2AN08 Mir7115-201ENSMUST00000184275 64 ntBASIC6.58□□□□□ -1.36
Ubr4A2AN08 AC167013.1-201ENSMUST00000228592 202 ntBASIC6.58□□□□□ -1.36
Ubr4A2AN08 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Fthl17b-201ENSMUST00000105006 842 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Gm5267-201ENSMUST00000191574 1045 ntBASIC6.58□□□□□ -1.36
Ubr4A2AN08 Gm37638-201ENSMUST00000194337 1123 ntBASIC6.58□□□□□ -1.36
Ubr4A2AN08 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Fxyd1-201ENSMUST00000039909 620 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ubr4A2AN08 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Gm12623-201ENSMUST00000119849 1983 ntBASIC6.57□□□□□ -1.36
Ubr4A2AN08 Gm13263-201ENSMUST00000121271 838 ntBASIC6.57□□□□□ -1.36
Ubr4A2AN08 Gm15196-201ENSMUST00000121406 482 ntBASIC6.57□□□□□ -1.36
Ubr4A2AN08 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ubr4A2AN08 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC6.57□□□□□ -1.36
Ubr4A2AN08 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ubr4A2AN08 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ubr4A2AN08 Gm23272-201ENSMUST00000104053 129 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms