Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav12d-1A0N8R0 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.75
Trav12d-1A0N8R0 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Gm26035-201ENSMUST00000083065 308 ntBASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Gm43677-201ENSMUST00000198098 2378 ntBASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav12d-1A0N8R0 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Gm16202-201ENSMUST00000117532 544 ntBASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Gm12291-201ENSMUST00000121627 311 ntBASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Gm15487-201ENSMUST00000122373 465 ntBASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Gm24694-201ENSMUST00000180054 110 ntBASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Gm27663-201ENSMUST00000184839 110 ntBASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Gm44069-201ENSMUST00000204898 506 ntBASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav12d-1A0N8R0 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms