Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Atg4a-psA0A0G2JFS9 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Atg4a-psA0A0G2JFS9 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Atg4a-psA0A0G2JFS9 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC15.59■□□□□ 0.09
Atg4a-psA0A0G2JFS9 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Atg4a-psA0A0G2JFS9 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Atg4a-psA0A0G2JFS9 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Atg4a-psA0A0G2JFS9 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Atg4a-psA0A0G2JFS9 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Atg4a-psA0A0G2JFS9 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Atg4a-psA0A0G2JFS9 Gm27196-201ENSMUST00000184787 2582 ntBASIC15.58■□□□□ 0.09
Atg4a-psA0A0G2JFS9 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC15.58■□□□□ 0.08
Atg4a-psA0A0G2JFS9 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Gm15703-201ENSMUST00000120250 880 ntBASIC15.58■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Atg4a-psA0A0G2JFS9 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Gm3890-201ENSMUST00000182416 207 ntBASIC15.58■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Atg4a-psA0A0G2JFS9 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Atg4a-psA0A0G2JFS9 AC169036.1-201ENSMUST00000227994 296 ntBASIC15.58■□□□□ 0.08
Atg4a-psA0A0G2JFS9 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Atg4a-psA0A0G2JFS9 AC154262.2-202ENSMUST00000225158 1331 ntBASIC15.58■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC15.58■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Gm22018-201ENSMUST00000104357 131 ntBASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Gm13394-201ENSMUST00000121658 1000 ntBASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Gm25857-201ENSMUST00000082788 129 ntBASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Gm26035-201ENSMUST00000083065 308 ntBASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Gm9431-201ENSMUST00000119765 1051 ntBASIC15.56■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Gm11964-201ENSMUST00000120982 444 ntBASIC15.56■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Gm14760-201ENSMUST00000121831 999 ntBASIC15.56■□□□□ 0.08
Atg4a-psA0A0G2JFS9 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atg4a-psA0A0G2JFS9 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Gm44758-201ENSMUST00000206096 2068 ntBASIC15.56■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atg4a-psA0A0G2JFS9 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms