Protein–RNA interactions for Protein: A0A0A6YWI9

Ighv1-11, Immunoglobulin heavy variable V1-11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-11A0A0A6YWI9 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.96
Ighv1-11A0A0A6YWI9 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.96
Ighv1-11A0A0A6YWI9 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC9.08□□□□□ -0.96
Ighv1-11A0A0A6YWI9 Gm15222-202ENSMUST00000228667 1726 ntBASIC9.08□□□□□ -0.96
Ighv1-11A0A0A6YWI9 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ighv1-11A0A0A6YWI9 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ighv1-11A0A0A6YWI9 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ighv1-11A0A0A6YWI9 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ighv1-11A0A0A6YWI9 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ighv1-11A0A0A6YWI9 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ighv1-11A0A0A6YWI9 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ighv1-11A0A0A6YWI9 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
Ighv1-11A0A0A6YWI9 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ighv1-11A0A0A6YWI9 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ighv1-11A0A0A6YWI9 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ighv1-11A0A0A6YWI9 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ighv1-11A0A0A6YWI9 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ighv1-11A0A0A6YWI9 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ighv1-11A0A0A6YWI9 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ighv1-11A0A0A6YWI9 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Ighv1-11A0A0A6YWI9 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Ighv1-11A0A0A6YWI9 Gm37391-201ENSMUST00000194891 2318 ntBASIC9.08□□□□□ -0.96
Ighv1-11A0A0A6YWI9 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ighv1-11A0A0A6YWI9 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ighv1-11A0A0A6YWI9 Gm6210-201ENSMUST00000204734 1942 ntBASIC9.08□□□□□ -0.96
Ighv1-11A0A0A6YWI9 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC9.08□□□□□ -0.96
Ighv1-11A0A0A6YWI9 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Ighv1-11A0A0A6YWI9 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ighv1-11A0A0A6YWI9 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC9.08□□□□□ -0.96
Ighv1-11A0A0A6YWI9 Ldha-ps-201ENSMUST00000119390 995 ntBASIC9.08□□□□□ -0.96
Ighv1-11A0A0A6YWI9 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC9.08□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms