Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav18A0A075B656 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav18A0A075B656 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav18A0A075B656 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav18A0A075B656 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav18A0A075B656 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav18A0A075B656 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav18A0A075B656 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav18A0A075B656 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav18A0A075B656 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.53□□□□□ -0.72
Trav18A0A075B656 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav18A0A075B656 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav18A0A075B656 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav18A0A075B656 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav18A0A075B656 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.53□□□□□ -0.72
Trav18A0A075B656 Mir686-201ENSMUST00000102174 109 ntBASIC10.53□□□□□ -0.72
Trav18A0A075B656 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav18A0A075B656 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC10.53□□□□□ -0.72
Trav18A0A075B656 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC10.53□□□□□ -0.72
Trav18A0A075B656 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC10.53□□□□□ -0.72
Trav18A0A075B656 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav18A0A075B656 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav18A0A075B656 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav18A0A075B656 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav18A0A075B656 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC10.53□□□□□ -0.72
Trav18A0A075B656 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC10.53□□□□□ -0.72
Trav18A0A075B656 Gm37917-201ENSMUST00000194711 392 ntBASIC10.53□□□□□ -0.72
Trav18A0A075B656 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC10.53□□□□□ -0.72
Trav18A0A075B656 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav18A0A075B656 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC10.53□□□□□ -0.72
Trav18A0A075B656 Gm44069-201ENSMUST00000204898 506 ntBASIC10.53□□□□□ -0.72
Trav18A0A075B656 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC10.53□□□□□ -0.72
Trav18A0A075B656 Gm18624-201ENSMUST00000220966 658 ntBASIC10.53□□□□□ -0.72
Trav18A0A075B656 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav18A0A075B656 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav18A0A075B656 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC10.53□□□□□ -0.72
Trav18A0A075B656 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav18A0A075B656 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav18A0A075B656 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav18A0A075B656 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav18A0A075B656 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav18A0A075B656 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav18A0A075B656 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC10.53□□□□□ -0.72
Trav18A0A075B656 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav18A0A075B656 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav18A0A075B656 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav18A0A075B656 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.53□□□□□ -0.72
Trav18A0A075B656 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Trav18A0A075B656 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Trav18A0A075B656 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.52□□□□□ -0.72
Trav18A0A075B656 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Trav18A0A075B656 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.52□□□□□ -0.72
Trav18A0A075B656 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Trav18A0A075B656 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav18A0A075B656 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav18A0A075B656 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav18A0A075B656 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav18A0A075B656 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav18A0A075B656 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav18A0A075B656 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav18A0A075B656 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.52□□□□□ -0.73
Trav18A0A075B656 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav18A0A075B656 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav18A0A075B656 Gm5687-201ENSMUST00000118252 640 ntBASIC10.52□□□□□ -0.73
Trav18A0A075B656 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav18A0A075B656 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav18A0A075B656 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav18A0A075B656 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav18A0A075B656 Gm5276-201ENSMUST00000196683 1047 ntBASIC10.52□□□□□ -0.73
Trav18A0A075B656 Gm42929-201ENSMUST00000198374 1286 ntBASIC10.52□□□□□ -0.73
Trav18A0A075B656 AC125206.2-201ENSMUST00000217454 574 ntBASIC10.52□□□□□ -0.73
Trav18A0A075B656 AC238811.3-201ENSMUST00000225422 709 ntBASIC10.52□□□□□ -0.73
Trav18A0A075B656 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav18A0A075B656 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Trav18A0A075B656 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav18A0A075B656 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Trav18A0A075B656 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav18A0A075B656 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav18A0A075B656 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav18A0A075B656 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav18A0A075B656 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav18A0A075B656 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav18A0A075B656 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav18A0A075B656 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav18A0A075B656 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav18A0A075B656 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav18A0A075B656 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav18A0A075B656 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms