Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Gm43463-201ENSMUST00000195967 1803 ntBASIC10.94□□□□□ -0.66
Gm3550W4VSN7 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3550W4VSN7 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3550W4VSN7 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3550W4VSN7 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC10.94□□□□□ -0.66
Gm3550W4VSN7 CT025535.1-201ENSMUST00000227172 491 ntBASIC10.94□□□□□ -0.66
Gm3550W4VSN7 AC125117.1-201ENSMUST00000228121 468 ntBASIC10.94□□□□□ -0.66
Gm3550W4VSN7 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3550W4VSN7 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3550W4VSN7 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3550W4VSN7 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC10.94□□□□□ -0.66
Gm3550W4VSN7 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3550W4VSN7 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3550W4VSN7 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.94□□□□□ -0.66
Gm3550W4VSN7 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3550W4VSN7 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3550W4VSN7 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3550W4VSN7 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3550W4VSN7 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3550W4VSN7 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3550W4VSN7 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Gm3550W4VSN7 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Gm3550W4VSN7 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3550W4VSN7 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3550W4VSN7 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3550W4VSN7 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3550W4VSN7 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3550W4VSN7 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.93□□□□□ -0.66
Gm3550W4VSN7 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3550W4VSN7 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Gm3550W4VSN7 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC10.93□□□□□ -0.66
Gm3550W4VSN7 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC10.93□□□□□ -0.66
Gm3550W4VSN7 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC10.93□□□□□ -0.66
Gm3550W4VSN7 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.93□□□□□ -0.66
Gm3550W4VSN7 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3550W4VSN7 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3550W4VSN7 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Gm3550W4VSN7 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3550W4VSN7 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3550W4VSN7 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3550W4VSN7 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3550W4VSN7 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3550W4VSN7 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC10.93□□□□□ -0.66
Gm3550W4VSN7 Gm5303-201ENSMUST00000117943 1252 ntBASIC10.93□□□□□ -0.66
Gm3550W4VSN7 Gm5276-201ENSMUST00000196683 1047 ntBASIC10.93□□□□□ -0.66
Gm3550W4VSN7 Gm18018-201ENSMUST00000198273 408 ntBASIC10.93□□□□□ -0.66
Gm3550W4VSN7 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3550W4VSN7 AC155252.1-201ENSMUST00000226462 1208 ntBASIC10.93□□□□□ -0.66
Gm3550W4VSN7 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3550W4VSN7 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3550W4VSN7 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.93□□□□□ -0.66
Gm3550W4VSN7 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC10.93□□□□□ -0.66
Gm3550W4VSN7 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3550W4VSN7 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3550W4VSN7 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3550W4VSN7 Gm9025-201ENSMUST00000122415 1575 ntBASIC10.93□□□□□ -0.66
Gm3550W4VSN7 AC113060.1-201ENSMUST00000225689 1573 ntBASIC10.93□□□□□ -0.66
Gm3550W4VSN7 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3550W4VSN7 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3550W4VSN7 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Gm3550W4VSN7 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3550W4VSN7 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Gm3550W4VSN7 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3550W4VSN7 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3550W4VSN7 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3550W4VSN7 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3550W4VSN7 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3550W4VSN7 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.92□□□□□ -0.66
Gm3550W4VSN7 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Gm3550W4VSN7 Gm44851-201ENSMUST00000205735 2309 ntBASIC10.92□□□□□ -0.66
Gm3550W4VSN7 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.92□□□□□ -0.66
Gm3550W4VSN7 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3550W4VSN7 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Gm3550W4VSN7 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC10.92□□□□□ -0.66
Gm3550W4VSN7 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3550W4VSN7 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3550W4VSN7 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Gm3550W4VSN7 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.92□□□□□ -0.66
Gm3550W4VSN7 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Gm3550W4VSN7 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3550W4VSN7 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3550W4VSN7 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3550W4VSN7 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3550W4VSN7 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3550W4VSN7 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3550W4VSN7 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3550W4VSN7 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC10.92□□□□□ -0.66
Gm3550W4VSN7 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC10.92□□□□□ -0.66
Gm3550W4VSN7 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC10.92□□□□□ -0.66
Gm3550W4VSN7 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC10.92□□□□□ -0.66
Gm3550W4VSN7 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3550W4VSN7 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Gm3550W4VSN7 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3550W4VSN7 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC10.92□□□□□ -0.66
Gm3550W4VSN7 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.92□□□□□ -0.66
Gm3550W4VSN7 Gm18473-201ENSMUST00000220543 868 ntBASIC10.92□□□□□ -0.66
Gm3550W4VSN7 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3550W4VSN7 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3550W4VSN7 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm3550W4VSN7 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms