Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Gm13689-201ENSMUST00000119360 685 ntBASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Gm28631-201ENSMUST00000190740 334 ntBASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Gm44397-201ENSMUST00000195950 113 ntBASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Gm6983-201ENSMUST00000214912 628 ntBASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Gm6218-201ENSMUST00000219812 628 ntBASIC11.61□□□□□ -0.55
H2afb3S4R1G7 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb3S4R1G7 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.61□□□□□ -0.55
H2afb3S4R1G7 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H2afb3S4R1G7 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.6□□□□□ -0.55
H2afb3S4R1G7 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb3S4R1G7 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb3S4R1G7 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb3S4R1G7 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb3S4R1G7 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb3S4R1G7 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb3S4R1G7 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb3S4R1G7 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb3S4R1G7 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb3S4R1G7 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb3S4R1G7 Gm12341-201ENSMUST00000119724 503 ntBASIC11.6□□□□□ -0.55
H2afb3S4R1G7 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.6□□□□□ -0.55
H2afb3S4R1G7 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.6□□□□□ -0.55
H2afb3S4R1G7 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb3S4R1G7 Itm2b-204ENSMUST00000228637 783 ntBASIC11.6□□□□□ -0.55
H2afb3S4R1G7 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb3S4R1G7 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb3S4R1G7 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.6□□□□□ -0.55
H2afb3S4R1G7 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb3S4R1G7 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
H2afb3S4R1G7 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb3S4R1G7 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
H2afb3S4R1G7 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.6□□□□□ -0.55
H2afb3S4R1G7 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.6□□□□□ -0.55
H2afb3S4R1G7 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb3S4R1G7 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb3S4R1G7 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
H2afb3S4R1G7 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
H2afb3S4R1G7 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Gm44855-201ENSMUST00000205725 362 ntBASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Gm16372-201ENSMUST00000073088 450 ntBASIC11.59□□□□□ -0.55
H2afb3S4R1G7 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms