Protein–RNA interactions for Protein: S4R181

Ccdc166, Coiled-coil domain-containing 166, mousemouse

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc166S4R181 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc166S4R181 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc166S4R181 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc166S4R181 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc166S4R181 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.37□□□□□ -0.43
Ccdc166S4R181 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc166S4R181 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc166S4R181 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ccdc166S4R181 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc166S4R181 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.37□□□□□ -0.43
Ccdc166S4R181 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc166S4R181 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ccdc166S4R181 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc166S4R181 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc166S4R181 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.36□□□□□ -0.43
Ccdc166S4R181 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.36□□□□□ -0.43
Ccdc166S4R181 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc166S4R181 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc166S4R181 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.36□□□□□ -0.43
Ccdc166S4R181 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc166S4R181 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc166S4R181 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.36□□□□□ -0.43
Ccdc166S4R181 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.36□□□□□ -0.43
Ccdc166S4R181 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ccdc166S4R181 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc166S4R181 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc166S4R181 Gm25261-201ENSMUST00000157416 134 ntBASIC12.36□□□□□ -0.43
Ccdc166S4R181 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc166S4R181 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.36□□□□□ -0.43
Ccdc166S4R181 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc166S4R181 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.36□□□□□ -0.43
Ccdc166S4R181 Gm27320-201ENSMUST00000184892 109 ntBASIC12.36□□□□□ -0.43
Ccdc166S4R181 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.36□□□□□ -0.43
Ccdc166S4R181 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.36□□□□□ -0.43
Ccdc166S4R181 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.36□□□□□ -0.43
Ccdc166S4R181 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc166S4R181 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc166S4R181 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc166S4R181 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc166S4R181 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ccdc166S4R181 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc166S4R181 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc166S4R181 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc166S4R181 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc166S4R181 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc166S4R181 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc166S4R181 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc166S4R181 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.36□□□□□ -0.43
Ccdc166S4R181 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Ccdc166S4R181 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Ccdc166S4R181 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.36□□□□□ -0.43
Ccdc166S4R181 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc166S4R181 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc166S4R181 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc166S4R181 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc166S4R181 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc166S4R181 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc166S4R181 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ccdc166S4R181 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Ccdc166S4R181 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc166S4R181 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc166S4R181 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Ccdc166S4R181 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccdc166S4R181 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ccdc166S4R181 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc166S4R181 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc166S4R181 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc166S4R181 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc166S4R181 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc166S4R181 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ccdc166S4R181 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc166S4R181 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc166S4R181 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Ccdc166S4R181 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ccdc166S4R181 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccdc166S4R181 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.35□□□□□ -0.43
Ccdc166S4R181 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc166S4R181 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc166S4R181 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc166S4R181 Gm6023-201ENSMUST00000118217 606 ntBASIC12.35□□□□□ -0.43
Ccdc166S4R181 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.35□□□□□ -0.43
Ccdc166S4R181 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccdc166S4R181 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.35□□□□□ -0.43
Ccdc166S4R181 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.35□□□□□ -0.43
Ccdc166S4R181 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.35□□□□□ -0.43
Ccdc166S4R181 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.35□□□□□ -0.43
Ccdc166S4R181 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.35□□□□□ -0.43
Ccdc166S4R181 Gm3786-201ENSMUST00000202659 378 ntBASIC12.35□□□□□ -0.43
Ccdc166S4R181 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc166S4R181 Gm10608-202ENSMUST00000213924 676 ntBASIC12.35□□□□□ -0.43
Ccdc166S4R181 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc166S4R181 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc166S4R181 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ccdc166S4R181 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc166S4R181 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc166S4R181 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.35□□□□□ -0.43
Ccdc166S4R181 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc166S4R181 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc166S4R181 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccdc166S4R181 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms