Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.34□□□□□ -0.27
Smarcb1Q9Z0H3 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcb1Q9Z0H3 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcb1Q9Z0H3 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcb1Q9Z0H3 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcb1Q9Z0H3 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.34□□□□□ -0.27
Smarcb1Q9Z0H3 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.34□□□□□ -0.27
Smarcb1Q9Z0H3 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcb1Q9Z0H3 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.34□□□□□ -0.27
Smarcb1Q9Z0H3 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Smarcb1Q9Z0H3 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.34□□□□□ -0.27
Smarcb1Q9Z0H3 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcb1Q9Z0H3 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Smarcb1Q9Z0H3 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.34□□□□□ -0.27
Smarcb1Q9Z0H3 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcb1Q9Z0H3 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcb1Q9Z0H3 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.34□□□□□ -0.27
Smarcb1Q9Z0H3 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcb1Q9Z0H3 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcb1Q9Z0H3 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.34□□□□□ -0.27
Smarcb1Q9Z0H3 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcb1Q9Z0H3 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcb1Q9Z0H3 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.34□□□□□ -0.27
Smarcb1Q9Z0H3 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcb1Q9Z0H3 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcb1Q9Z0H3 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcb1Q9Z0H3 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Smarcb1Q9Z0H3 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Smarcb1Q9Z0H3 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.33□□□□□ -0.27
Smarcb1Q9Z0H3 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Smarcb1Q9Z0H3 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Gm11531-201ENSMUST00000117614 555 ntBASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Gm13736-201ENSMUST00000119272 253 ntBASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Gm27023-201ENSMUST00000182372 285 ntBASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcb1Q9Z0H3 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcb1Q9Z0H3 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcb1Q9Z0H3 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcb1Q9Z0H3 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Smarcb1Q9Z0H3 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
Smarcb1Q9Z0H3 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcb1Q9Z0H3 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Smarcb1Q9Z0H3 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcb1Q9Z0H3 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Smarcb1Q9Z0H3 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcb1Q9Z0H3 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcb1Q9Z0H3 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.32□□□□□ -0.28
Smarcb1Q9Z0H3 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcb1Q9Z0H3 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.32□□□□□ -0.28
Smarcb1Q9Z0H3 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.32□□□□□ -0.28
Smarcb1Q9Z0H3 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Smarcb1Q9Z0H3 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcb1Q9Z0H3 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.32□□□□□ -0.28
Smarcb1Q9Z0H3 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcb1Q9Z0H3 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.32□□□□□ -0.28
Smarcb1Q9Z0H3 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.32□□□□□ -0.28
Smarcb1Q9Z0H3 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcb1Q9Z0H3 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcb1Q9Z0H3 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms