Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 AC154767.3-201ENSMUST00000225150 1342 ntBASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm6888-201ENSMUST00000221983 706 ntBASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cx3cr1Q9Z0D9 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm6447-201ENSMUST00000118905 835 ntBASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm24513-201ENSMUST00000174964 138 ntBASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 CT943659.1-201ENSMUST00000215459 326 ntBASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cx3cr1Q9Z0D9 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms