Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf40aQ9R1C7 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf40aQ9R1C7 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Prpf40aQ9R1C7 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf40aQ9R1C7 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf40aQ9R1C7 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf40aQ9R1C7 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf40aQ9R1C7 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf40aQ9R1C7 Gm11803-201ENSMUST00000119966 444 ntBASIC14.18□□□□□ -0.14
Prpf40aQ9R1C7 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Prpf40aQ9R1C7 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf40aQ9R1C7 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Prpf40aQ9R1C7 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.18□□□□□ -0.14
Prpf40aQ9R1C7 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.18□□□□□ -0.14
Prpf40aQ9R1C7 AC132446.1-201ENSMUST00000222655 226 ntBASIC14.18□□□□□ -0.14
Prpf40aQ9R1C7 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Prpf40aQ9R1C7 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf40aQ9R1C7 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf40aQ9R1C7 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf40aQ9R1C7 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.18□□□□□ -0.14
Prpf40aQ9R1C7 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Prpf40aQ9R1C7 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.18□□□□□ -0.14
Prpf40aQ9R1C7 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf40aQ9R1C7 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf40aQ9R1C7 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf40aQ9R1C7 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf40aQ9R1C7 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf40aQ9R1C7 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Prpf40aQ9R1C7 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf40aQ9R1C7 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Prpf40aQ9R1C7 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf40aQ9R1C7 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf40aQ9R1C7 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Prpf40aQ9R1C7 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf40aQ9R1C7 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf40aQ9R1C7 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf40aQ9R1C7 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf40aQ9R1C7 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf40aQ9R1C7 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf40aQ9R1C7 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf40aQ9R1C7 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Prpf40aQ9R1C7 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Prpf40aQ9R1C7 Gm11978-201ENSMUST00000122315 466 ntBASIC14.17□□□□□ -0.14
Prpf40aQ9R1C7 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.17□□□□□ -0.14
Prpf40aQ9R1C7 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf40aQ9R1C7 Gm8810-201ENSMUST00000172895 754 ntBASIC14.17□□□□□ -0.14
Prpf40aQ9R1C7 Gm37922-201ENSMUST00000195596 455 ntBASIC14.17□□□□□ -0.14
Prpf40aQ9R1C7 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf40aQ9R1C7 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
Prpf40aQ9R1C7 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf40aQ9R1C7 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf40aQ9R1C7 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf40aQ9R1C7 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf40aQ9R1C7 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Prpf40aQ9R1C7 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Prpf40aQ9R1C7 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf40aQ9R1C7 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf40aQ9R1C7 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Prpf40aQ9R1C7 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf40aQ9R1C7 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf40aQ9R1C7 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf40aQ9R1C7 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.16□□□□□ -0.14
Prpf40aQ9R1C7 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf40aQ9R1C7 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Prpf40aQ9R1C7 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf40aQ9R1C7 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.16□□□□□ -0.14
Prpf40aQ9R1C7 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf40aQ9R1C7 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf40aQ9R1C7 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.16□□□□□ -0.14
Prpf40aQ9R1C7 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf40aQ9R1C7 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf40aQ9R1C7 Gm8602-201ENSMUST00000184045 607 ntBASIC14.16□□□□□ -0.14
Prpf40aQ9R1C7 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Prpf40aQ9R1C7 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.16□□□□□ -0.14
Prpf40aQ9R1C7 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.16□□□□□ -0.14
Prpf40aQ9R1C7 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf40aQ9R1C7 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.16□□□□□ -0.14
Prpf40aQ9R1C7 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf40aQ9R1C7 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf40aQ9R1C7 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf40aQ9R1C7 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf40aQ9R1C7 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.16□□□□□ -0.14
Prpf40aQ9R1C7 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf40aQ9R1C7 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf40aQ9R1C7 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf40aQ9R1C7 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf40aQ9R1C7 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.16□□□□□ -0.14
Prpf40aQ9R1C7 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Prpf40aQ9R1C7 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Prpf40aQ9R1C7 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf40aQ9R1C7 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf40aQ9R1C7 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf40aQ9R1C7 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf40aQ9R1C7 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Prpf40aQ9R1C7 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.15□□□□□ -0.14
Prpf40aQ9R1C7 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Prpf40aQ9R1C7 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf40aQ9R1C7 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf40aQ9R1C7 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Prpf40aQ9R1C7 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms