Protein–RNA interactions for Protein: Q9JIT0

Lmbr1, Limb region 1 protein, mousemouse

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmbr1Q9JIT0 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Lmbr1Q9JIT0 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lmbr1Q9JIT0 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lmbr1Q9JIT0 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lmbr1Q9JIT0 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lmbr1Q9JIT0 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lmbr1Q9JIT0 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lmbr1Q9JIT0 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lmbr1Q9JIT0 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Lmbr1Q9JIT0 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lmbr1Q9JIT0 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Lmbr1Q9JIT0 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lmbr1Q9JIT0 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
Lmbr1Q9JIT0 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lmbr1Q9JIT0 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Lmbr1Q9JIT0 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Lmbr1Q9JIT0 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lmbr1Q9JIT0 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.78□□□□□ -0.04
Lmbr1Q9JIT0 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lmbr1Q9JIT0 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lmbr1Q9JIT0 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lmbr1Q9JIT0 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.78□□□□□ -0.04
Lmbr1Q9JIT0 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.78□□□□□ -0.04
Lmbr1Q9JIT0 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.78□□□□□ -0.04
Lmbr1Q9JIT0 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Lmbr1Q9JIT0 Mir6420-201ENSMUST00000185032 102 ntBASIC14.78□□□□□ -0.04
Lmbr1Q9JIT0 Gm40466-201ENSMUST00000212174 422 ntBASIC14.78□□□□□ -0.04
Lmbr1Q9JIT0 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lmbr1Q9JIT0 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lmbr1Q9JIT0 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lmbr1Q9JIT0 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lmbr1Q9JIT0 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lmbr1Q9JIT0 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lmbr1Q9JIT0 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lmbr1Q9JIT0 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lmbr1Q9JIT0 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lmbr1Q9JIT0 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lmbr1Q9JIT0 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Lmbr1Q9JIT0 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lmbr1Q9JIT0 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lmbr1Q9JIT0 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lmbr1Q9JIT0 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Lmbr1Q9JIT0 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.77□□□□□ -0.04
Lmbr1Q9JIT0 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Lmbr1Q9JIT0 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Lmbr1Q9JIT0 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lmbr1Q9JIT0 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Lmbr1Q9JIT0 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.77□□□□□ -0.04
Lmbr1Q9JIT0 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Lmbr1Q9JIT0 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lmbr1Q9JIT0 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lmbr1Q9JIT0 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Lmbr1Q9JIT0 Gm10156-201ENSMUST00000122364 462 ntBASIC14.77□□□□□ -0.05
Lmbr1Q9JIT0 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.77□□□□□ -0.05
Lmbr1Q9JIT0 Gm17420-201ENSMUST00000164753 153 ntBASIC14.77□□□□□ -0.05
Lmbr1Q9JIT0 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Lmbr1Q9JIT0 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lmbr1Q9JIT0 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.77□□□□□ -0.05
Lmbr1Q9JIT0 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.77□□□□□ -0.05
Lmbr1Q9JIT0 Gm42693-201ENSMUST00000196779 631 ntBASIC14.77□□□□□ -0.05
Lmbr1Q9JIT0 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.77□□□□□ -0.05
Lmbr1Q9JIT0 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.77□□□□□ -0.05
Lmbr1Q9JIT0 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.77□□□□□ -0.05
Lmbr1Q9JIT0 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.77□□□□□ -0.05
Lmbr1Q9JIT0 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.77□□□□□ -0.05
Lmbr1Q9JIT0 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Lmbr1Q9JIT0 Gm10478-201ENSMUST00000084451 396 ntBASIC14.77□□□□□ -0.05
Lmbr1Q9JIT0 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Lmbr1Q9JIT0 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Lmbr1Q9JIT0 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lmbr1Q9JIT0 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lmbr1Q9JIT0 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lmbr1Q9JIT0 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lmbr1Q9JIT0 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lmbr1Q9JIT0 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Lmbr1Q9JIT0 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lmbr1Q9JIT0 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lmbr1Q9JIT0 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lmbr1Q9JIT0 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Lmbr1Q9JIT0 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.76□□□□□ -0.05
Lmbr1Q9JIT0 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Lmbr1Q9JIT0 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lmbr1Q9JIT0 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Lmbr1Q9JIT0 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.76□□□□□ -0.05
Lmbr1Q9JIT0 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lmbr1Q9JIT0 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lmbr1Q9JIT0 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Lmbr1Q9JIT0 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Lmbr1Q9JIT0 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lmbr1Q9JIT0 Gm8213-201ENSMUST00000118191 441 ntBASIC14.76□□□□□ -0.05
Lmbr1Q9JIT0 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.76□□□□□ -0.05
Lmbr1Q9JIT0 Gm45331-201ENSMUST00000209868 554 ntBASIC14.76□□□□□ -0.05
Lmbr1Q9JIT0 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lmbr1Q9JIT0 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lmbr1Q9JIT0 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lmbr1Q9JIT0 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lmbr1Q9JIT0 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lmbr1Q9JIT0 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lmbr1Q9JIT0 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lmbr1Q9JIT0 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms