Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC15.29■□□□□ 0.04
Ube3bQ9ES34 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC15.29■□□□□ 0.04
Ube3bQ9ES34 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3bQ9ES34 Gm8018-201ENSMUST00000173536 789 ntBASIC15.29■□□□□ 0.04
Ube3bQ9ES34 Gm45925-201ENSMUST00000218882 744 ntBASIC15.29■□□□□ 0.04
Ube3bQ9ES34 AC154171.1-201ENSMUST00000224610 643 ntBASIC15.29■□□□□ 0.04
Ube3bQ9ES34 CT025533.2-201ENSMUST00000228715 1248 ntBASIC15.29■□□□□ 0.04
Ube3bQ9ES34 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3bQ9ES34 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3bQ9ES34 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3bQ9ES34 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC15.29■□□□□ 0.04
Ube3bQ9ES34 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3bQ9ES34 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3bQ9ES34 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Ube3bQ9ES34 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ube3bQ9ES34 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Ube3bQ9ES34 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3bQ9ES34 Gm37737-201ENSMUST00000195013 1638 ntBASIC15.28■□□□□ 0.04
Ube3bQ9ES34 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ube3bQ9ES34 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.28■□□□□ 0.04
Ube3bQ9ES34 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3bQ9ES34 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3bQ9ES34 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC15.28■□□□□ 0.04
Ube3bQ9ES34 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3bQ9ES34 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ube3bQ9ES34 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC15.28■□□□□ 0.04
Ube3bQ9ES34 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ube3bQ9ES34 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Ube3bQ9ES34 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ube3bQ9ES34 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3bQ9ES34 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ube3bQ9ES34 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3bQ9ES34 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3bQ9ES34 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC15.28■□□□□ 0.04
Ube3bQ9ES34 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3bQ9ES34 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3bQ9ES34 Gm15703-201ENSMUST00000120250 880 ntBASIC15.28■□□□□ 0.04
Ube3bQ9ES34 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3bQ9ES34 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3bQ9ES34 Gm8176-201ENSMUST00000191297 1099 ntBASIC15.28■□□□□ 0.04
Ube3bQ9ES34 Gm6546-201ENSMUST00000192096 766 ntBASIC15.28■□□□□ 0.04
Ube3bQ9ES34 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3bQ9ES34 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3bQ9ES34 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ube3bQ9ES34 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3bQ9ES34 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3bQ9ES34 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Ube3bQ9ES34 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3bQ9ES34 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Ube3bQ9ES34 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3bQ9ES34 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3bQ9ES34 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Ube3bQ9ES34 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3bQ9ES34 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Ube3bQ9ES34 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC15.27■□□□□ 0.04
Ube3bQ9ES34 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube3bQ9ES34 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Ube3bQ9ES34 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.27■□□□□ 0.04
Ube3bQ9ES34 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube3bQ9ES34 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ube3bQ9ES34 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube3bQ9ES34 Gm8617-201ENSMUST00000118796 2222 ntBASIC15.27■□□□□ 0.04
Ube3bQ9ES34 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ube3bQ9ES34 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Ube3bQ9ES34 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ube3bQ9ES34 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube3bQ9ES34 Gm22323-201ENSMUST00000103832 109 ntBASIC15.27■□□□□ 0.04
Ube3bQ9ES34 Gm24255-201ENSMUST00000104481 128 ntBASIC15.27■□□□□ 0.04
Ube3bQ9ES34 Gm12058-201ENSMUST00000118614 437 ntBASIC15.27■□□□□ 0.04
Ube3bQ9ES34 Gm13875-201ENSMUST00000120162 282 ntBASIC15.27■□□□□ 0.04
Ube3bQ9ES34 Gm5863-201ENSMUST00000121760 1008 ntBASIC15.27■□□□□ 0.04
Ube3bQ9ES34 Gm7584-201ENSMUST00000175829 940 ntBASIC15.27■□□□□ 0.04
Ube3bQ9ES34 Gm2546-201ENSMUST00000182630 991 ntBASIC15.27■□□□□ 0.04
Ube3bQ9ES34 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC15.27■□□□□ 0.04
Ube3bQ9ES34 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC15.27■□□□□ 0.04
Ube3bQ9ES34 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC15.27■□□□□ 0.04
Ube3bQ9ES34 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ube3bQ9ES34 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ube3bQ9ES34 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC15.27■□□□□ 0.04
Ube3bQ9ES34 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Ube3bQ9ES34 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ube3bQ9ES34 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
Ube3bQ9ES34 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ube3bQ9ES34 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ube3bQ9ES34 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Ube3bQ9ES34 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ube3bQ9ES34 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ube3bQ9ES34 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ube3bQ9ES34 Gm19221-201ENSMUST00000221827 1477 ntBASIC15.27■□□□□ 0.03
Ube3bQ9ES34 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms