Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Gm9719-201ENSMUST00000162765 543 ntBASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Gm10253-201ENSMUST00000194270 940 ntBASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Chchd1-203ENSMUST00000224633 557 ntBASIC12.37□□□□□ -0.43
Ube4bQ9ES00 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ube4bQ9ES00 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ube4bQ9ES00 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.36□□□□□ -0.43
Ube4bQ9ES00 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ube4bQ9ES00 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ube4bQ9ES00 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.36□□□□□ -0.43
Ube4bQ9ES00 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ube4bQ9ES00 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ube4bQ9ES00 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ube4bQ9ES00 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ube4bQ9ES00 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ube4bQ9ES00 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ube4bQ9ES00 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ube4bQ9ES00 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ube4bQ9ES00 Gm6736-201ENSMUST00000166583 948 ntBASIC12.36□□□□□ -0.43
Ube4bQ9ES00 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ube4bQ9ES00 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.36□□□□□ -0.43
Ube4bQ9ES00 Gm29541-201ENSMUST00000191351 678 ntBASIC12.36□□□□□ -0.43
Ube4bQ9ES00 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.36□□□□□ -0.43
Ube4bQ9ES00 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ube4bQ9ES00 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.36□□□□□ -0.43
Ube4bQ9ES00 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Ube4bQ9ES00 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ube4bQ9ES00 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ube4bQ9ES00 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ube4bQ9ES00 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.36□□□□□ -0.43
Ube4bQ9ES00 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ube4bQ9ES00 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ube4bQ9ES00 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.36□□□□□ -0.43
Ube4bQ9ES00 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ube4bQ9ES00 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ube4bQ9ES00 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ube4bQ9ES00 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ube4bQ9ES00 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Ube4bQ9ES00 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ube4bQ9ES00 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ube4bQ9ES00 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ube4bQ9ES00 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Ube4bQ9ES00 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ube4bQ9ES00 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ube4bQ9ES00 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ube4bQ9ES00 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.35□□□□□ -0.43
Ube4bQ9ES00 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Ube4bQ9ES00 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.35□□□□□ -0.43
Ube4bQ9ES00 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ube4bQ9ES00 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ube4bQ9ES00 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ube4bQ9ES00 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ube4bQ9ES00 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ube4bQ9ES00 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.35□□□□□ -0.43
Ube4bQ9ES00 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ube4bQ9ES00 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ube4bQ9ES00 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.35□□□□□ -0.43
Ube4bQ9ES00 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ube4bQ9ES00 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ube4bQ9ES00 Mir125a-201ENSMUST00000083545 68 ntBASIC12.35□□□□□ -0.43
Ube4bQ9ES00 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ube4bQ9ES00 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ube4bQ9ES00 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ube4bQ9ES00 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ube4bQ9ES00 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ube4bQ9ES00 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ube4bQ9ES00 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.35□□□□□ -0.43
Ube4bQ9ES00 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ube4bQ9ES00 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ube4bQ9ES00 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ube4bQ9ES00 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms