Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tubb3Q9ERD7 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.81□□□□□ -0.36
Tubb3Q9ERD7 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tubb3Q9ERD7 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tubb3Q9ERD7 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.81□□□□□ -0.36
Tubb3Q9ERD7 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tubb3Q9ERD7 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.81□□□□□ -0.36
Tubb3Q9ERD7 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tubb3Q9ERD7 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.81□□□□□ -0.36
Tubb3Q9ERD7 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.81□□□□□ -0.36
Tubb3Q9ERD7 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tubb3Q9ERD7 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.81□□□□□ -0.36
Tubb3Q9ERD7 Gm29649-201ENSMUST00000185649 419 ntBASIC12.81□□□□□ -0.36
Tubb3Q9ERD7 Gm29608-201ENSMUST00000190444 463 ntBASIC12.81□□□□□ -0.36
Tubb3Q9ERD7 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.81□□□□□ -0.36
Tubb3Q9ERD7 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.81□□□□□ -0.36
Tubb3Q9ERD7 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.81□□□□□ -0.36
Tubb3Q9ERD7 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.81□□□□□ -0.36
Tubb3Q9ERD7 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tubb3Q9ERD7 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tubb3Q9ERD7 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tubb3Q9ERD7 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tubb3Q9ERD7 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tubb3Q9ERD7 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tubb3Q9ERD7 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tubb3Q9ERD7 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.81□□□□□ -0.36
Tubb3Q9ERD7 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tubb3Q9ERD7 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tubb3Q9ERD7 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tubb3Q9ERD7 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tubb3Q9ERD7 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Tubb3Q9ERD7 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Tubb3Q9ERD7 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Tubb3Q9ERD7 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb3Q9ERD7 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb3Q9ERD7 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Tubb3Q9ERD7 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb3Q9ERD7 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.8□□□□□ -0.36
Tubb3Q9ERD7 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb3Q9ERD7 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.8□□□□□ -0.36
Tubb3Q9ERD7 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Tubb3Q9ERD7 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb3Q9ERD7 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.8□□□□□ -0.36
Tubb3Q9ERD7 Gm13226-201ENSMUST00000117838 404 ntBASIC12.8□□□□□ -0.36
Tubb3Q9ERD7 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb3Q9ERD7 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb3Q9ERD7 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb3Q9ERD7 Gm24196-201ENSMUST00000179161 110 ntBASIC12.8□□□□□ -0.36
Tubb3Q9ERD7 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Tubb3Q9ERD7 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb3Q9ERD7 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb3Q9ERD7 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb3Q9ERD7 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb3Q9ERD7 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.8□□□□□ -0.36
Tubb3Q9ERD7 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb3Q9ERD7 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.8□□□□□ -0.36
Tubb3Q9ERD7 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb3Q9ERD7 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb3Q9ERD7 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb3Q9ERD7 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.8□□□□□ -0.36
Tubb3Q9ERD7 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb3Q9ERD7 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.8□□□□□ -0.36
Tubb3Q9ERD7 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb3Q9ERD7 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.8□□□□□ -0.36
Tubb3Q9ERD7 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb3Q9ERD7 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb3Q9ERD7 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb3Q9ERD7 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb3Q9ERD7 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb3Q9ERD7 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubb3Q9ERD7 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Gm12742-201ENSMUST00000117326 410 ntBASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Gm45784-201ENSMUST00000188360 142 ntBASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Gm38144-201ENSMUST00000192790 465 ntBASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms