Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm13035-201ENSMUST00000117496 342 ntBASIC13.16□□□□□ -0.3
Nkx2-4Q9EQM3 Gm6506-201ENSMUST00000119775 1136 ntBASIC13.16□□□□□ -0.3
Nkx2-4Q9EQM3 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-4Q9EQM3 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Nkx2-4Q9EQM3 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-4Q9EQM3 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-4Q9EQM3 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-4Q9EQM3 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-4Q9EQM3 Gm29155-201ENSMUST00000185910 269 ntBASIC13.16□□□□□ -0.3
Nkx2-4Q9EQM3 Gm19287-201ENSMUST00000203190 358 ntBASIC13.16□□□□□ -0.3
Nkx2-4Q9EQM3 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-4Q9EQM3 AC132901.1-201ENSMUST00000224345 508 ntBASIC13.16□□□□□ -0.3
Nkx2-4Q9EQM3 Gm1821-202ENSMUST00000227415 750 ntBASIC13.16□□□□□ -0.3
Nkx2-4Q9EQM3 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-4Q9EQM3 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-4Q9EQM3 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-4Q9EQM3 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-4Q9EQM3 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-4Q9EQM3 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.16□□□□□ -0.3
Nkx2-4Q9EQM3 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-4Q9EQM3 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Nkx2-4Q9EQM3 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-4Q9EQM3 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-4Q9EQM3 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-4Q9EQM3 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Nkx2-4Q9EQM3 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.16□□□□□ -0.3
Nkx2-4Q9EQM3 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-4Q9EQM3 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-4Q9EQM3 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-4Q9EQM3 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-4Q9EQM3 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-4Q9EQM3 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Nkx2-4Q9EQM3 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-4Q9EQM3 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-4Q9EQM3 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-4Q9EQM3 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-4Q9EQM3 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-4Q9EQM3 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-4Q9EQM3 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-4Q9EQM3 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-4Q9EQM3 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-4Q9EQM3 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.15□□□□□ -0.3
Nkx2-4Q9EQM3 Gm23251-201ENSMUST00000103773 110 ntBASIC13.15□□□□□ -0.3
Nkx2-4Q9EQM3 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-4Q9EQM3 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.15□□□□□ -0.3
Nkx2-4Q9EQM3 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.15□□□□□ -0.3
Nkx2-4Q9EQM3 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-4Q9EQM3 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-4Q9EQM3 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-4Q9EQM3 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Nkx2-4Q9EQM3 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-4Q9EQM3 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-4Q9EQM3 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.15□□□□□ -0.3
Nkx2-4Q9EQM3 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.15□□□□□ -0.3
Nkx2-4Q9EQM3 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-4Q9EQM3 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-4Q9EQM3 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Nkx2-4Q9EQM3 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkx2-4Q9EQM3 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Nkx2-4Q9EQM3 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.15□□□□□ -0.31
Nkx2-4Q9EQM3 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Nkx2-4Q9EQM3 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 Gm37246-201ENSMUST00000192665 835 ntBASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 Gm18893-201ENSMUST00000198416 943 ntBASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 AC124457.1-201ENSMUST00000198845 120 ntBASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 AC099645.1-201ENSMUST00000226476 1105 ntBASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 CT030637.1-201ENSMUST00000228016 669 ntBASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Nkx2-4Q9EQM3 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms