Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Gm24659-201ENSMUST00000180212 110 ntBASIC12.09□□□□□ -0.47
Hmgn3Q9DCB1 Gm24169-201ENSMUST00000180244 110 ntBASIC12.09□□□□□ -0.47
Hmgn3Q9DCB1 Gm23689-201ENSMUST00000180354 110 ntBASIC12.09□□□□□ -0.47
Hmgn3Q9DCB1 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.09□□□□□ -0.47
Hmgn3Q9DCB1 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.09□□□□□ -0.47
Hmgn3Q9DCB1 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.09□□□□□ -0.47
Hmgn3Q9DCB1 Gm27359-201ENSMUST00000184153 110 ntBASIC12.09□□□□□ -0.47
Hmgn3Q9DCB1 Gm27785-201ENSMUST00000184268 110 ntBASIC12.09□□□□□ -0.47
Hmgn3Q9DCB1 Gm27466-201ENSMUST00000184396 110 ntBASIC12.09□□□□□ -0.47
Hmgn3Q9DCB1 Gm27703-201ENSMUST00000184836 110 ntBASIC12.09□□□□□ -0.47
Hmgn3Q9DCB1 Gm18766-201ENSMUST00000189811 808 ntBASIC12.09□□□□□ -0.47
Hmgn3Q9DCB1 Gm29541-201ENSMUST00000191351 678 ntBASIC12.09□□□□□ -0.47
Hmgn3Q9DCB1 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.09□□□□□ -0.47
Hmgn3Q9DCB1 Gm43474-201ENSMUST00000196415 774 ntBASIC12.09□□□□□ -0.47
Hmgn3Q9DCB1 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hmgn3Q9DCB1 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmgn3Q9DCB1 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmgn3Q9DCB1 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.09□□□□□ -0.47
Hmgn3Q9DCB1 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmgn3Q9DCB1 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmgn3Q9DCB1 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hmgn3Q9DCB1 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmgn3Q9DCB1 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmgn3Q9DCB1 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hmgn3Q9DCB1 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.09□□□□□ -0.47
Hmgn3Q9DCB1 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hmgn3Q9DCB1 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Hmgn3Q9DCB1 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Hmgn3Q9DCB1 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.47
Hmgn3Q9DCB1 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Map1b-203ENSMUST00000223725 2669 ntBASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Gm24513-201ENSMUST00000174964 138 ntBASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Gm27772-201ENSMUST00000184900 187 ntBASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmgn3Q9DCB1 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn3Q9DCB1 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn3Q9DCB1 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn3Q9DCB1 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn3Q9DCB1 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn3Q9DCB1 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn3Q9DCB1 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.07□□□□□ -0.48
Hmgn3Q9DCB1 Gm14822-201ENSMUST00000122247 291 ntBASIC12.07□□□□□ -0.48
Hmgn3Q9DCB1 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn3Q9DCB1 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn3Q9DCB1 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn3Q9DCB1 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.07□□□□□ -0.48
Hmgn3Q9DCB1 Gm27397-201ENSMUST00000184997 107 ntBASIC12.07□□□□□ -0.48
Hmgn3Q9DCB1 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.07□□□□□ -0.48
Hmgn3Q9DCB1 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.07□□□□□ -0.48
Hmgn3Q9DCB1 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn3Q9DCB1 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn3Q9DCB1 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn3Q9DCB1 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Hmgn3Q9DCB1 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn3Q9DCB1 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Hmgn3Q9DCB1 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.07□□□□□ -0.48
Hmgn3Q9DCB1 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn3Q9DCB1 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn3Q9DCB1 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn3Q9DCB1 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmgn3Q9DCB1 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms