Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Gm5687-201ENSMUST00000118252 640 ntBASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdc40Q9DC48 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdc40Q9DC48 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdc40Q9DC48 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdc40Q9DC48 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.98□□□□□ -0.49
Cdc40Q9DC48 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdc40Q9DC48 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.98□□□□□ -0.49
Cdc40Q9DC48 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdc40Q9DC48 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.98□□□□□ -0.49
Cdc40Q9DC48 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdc40Q9DC48 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdc40Q9DC48 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdc40Q9DC48 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cdc40Q9DC48 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cdc40Q9DC48 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdc40Q9DC48 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdc40Q9DC48 Gm5187-201ENSMUST00000117317 991 ntBASIC11.98□□□□□ -0.49
Cdc40Q9DC48 Gm6447-201ENSMUST00000118905 835 ntBASIC11.98□□□□□ -0.49
Cdc40Q9DC48 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.98□□□□□ -0.49
Cdc40Q9DC48 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.98□□□□□ -0.49
Cdc40Q9DC48 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdc40Q9DC48 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.98□□□□□ -0.49
Cdc40Q9DC48 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdc40Q9DC48 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdc40Q9DC48 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdc40Q9DC48 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Cdc40Q9DC48 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Cdc40Q9DC48 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.98□□□□□ -0.49
Cdc40Q9DC48 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdc40Q9DC48 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdc40Q9DC48 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdc40Q9DC48 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdc40Q9DC48 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cdc40Q9DC48 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cdc40Q9DC48 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdc40Q9DC48 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdc40Q9DC48 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdc40Q9DC48 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdc40Q9DC48 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdc40Q9DC48 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdc40Q9DC48 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdc40Q9DC48 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdc40Q9DC48 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdc40Q9DC48 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.97□□□□□ -0.49
Cdc40Q9DC48 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.97□□□□□ -0.49
Cdc40Q9DC48 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdc40Q9DC48 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdc40Q9DC48 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cdc40Q9DC48 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdc40Q9DC48 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdc40Q9DC48 Gm15198-201ENSMUST00000117283 177 ntBASIC11.97□□□□□ -0.49
Cdc40Q9DC48 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.97□□□□□ -0.49
Cdc40Q9DC48 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms