Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Mrpl55Q9CZ83 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
Mrpl55Q9CZ83 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC8.59□□□□□ -1.04
Mrpl55Q9CZ83 Gm17244-201ENSMUST00000192482 3416 ntBASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Erbb4-202ENSMUST00000121473 12037 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Gm4804-201ENSMUST00000182234 999 ntBASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Gm8515-201ENSMUST00000194852 576 ntBASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 AC154846.1-201ENSMUST00000226278 862 ntBASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Gm9797-201ENSMUST00000052902 613 ntBASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Hist1h2al-201ENSMUST00000091708 339 ntBASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Mrpl55Q9CZ83 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 Ldb3-207ENSMUST00000227819 1499 ntBASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 Gm7104-201ENSMUST00000179741 2532 ntBASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 H2-Pa-201ENSMUST00000182803 626 ntBASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 AL593843.1-201ENSMUST00000195891 145 ntBASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 Ighv8-14-201ENSMUST00000196781 358 ntBASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 AC153872.1-201ENSMUST00000199539 128 ntBASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 Gm45195-201ENSMUST00000205597 1008 ntBASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 Gm19220-201ENSMUST00000222682 803 ntBASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 AC154687.2-201ENSMUST00000223853 640 ntBASIC8.57□□□□□ -1.04
Mrpl55Q9CZ83 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms