Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 Gm3436-201ENSMUST00000179930 840 ntBASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 Chchd1-203ENSMUST00000224633 557 ntBASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx47Q9CWX9 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ddx47Q9CWX9 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC13.22□□□□□ -0.29
Ddx47Q9CWX9 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx47Q9CWX9 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx47Q9CWX9 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx47Q9CWX9 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx47Q9CWX9 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx47Q9CWX9 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Ddx47Q9CWX9 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx47Q9CWX9 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Ddx47Q9CWX9 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx47Q9CWX9 Gm6447-201ENSMUST00000118905 835 ntBASIC13.22□□□□□ -0.29
Ddx47Q9CWX9 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.22□□□□□ -0.29
Ddx47Q9CWX9 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.22□□□□□ -0.29
Ddx47Q9CWX9 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx47Q9CWX9 Gm26308-201ENSMUST00000157768 69 ntBASIC13.22□□□□□ -0.29
Ddx47Q9CWX9 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx47Q9CWX9 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.22□□□□□ -0.29
Ddx47Q9CWX9 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx47Q9CWX9 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx47Q9CWX9 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ddx47Q9CWX9 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx47Q9CWX9 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx47Q9CWX9 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx47Q9CWX9 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx47Q9CWX9 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx47Q9CWX9 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx47Q9CWX9 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
Ddx47Q9CWX9 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx47Q9CWX9 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx47Q9CWX9 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx47Q9CWX9 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ddx47Q9CWX9 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Ddx47Q9CWX9 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx47Q9CWX9 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx47Q9CWX9 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx47Q9CWX9 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Ddx47Q9CWX9 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx47Q9CWX9 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ddx47Q9CWX9 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx47Q9CWX9 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx47Q9CWX9 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.21□□□□□ -0.29
Ddx47Q9CWX9 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.21□□□□□ -0.29
Ddx47Q9CWX9 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx47Q9CWX9 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx47Q9CWX9 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx47Q9CWX9 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ddx47Q9CWX9 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Ddx47Q9CWX9 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.21□□□□□ -0.29
Ddx47Q9CWX9 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx47Q9CWX9 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.21□□□□□ -0.29
Ddx47Q9CWX9 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.21□□□□□ -0.29
Ddx47Q9CWX9 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.21□□□□□ -0.29
Ddx47Q9CWX9 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx47Q9CWX9 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx47Q9CWX9 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ddx47Q9CWX9 Gm10253-201ENSMUST00000194270 940 ntBASIC13.21□□□□□ -0.29
Ddx47Q9CWX9 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Ddx47Q9CWX9 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx47Q9CWX9 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx47Q9CWX9 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms