Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpa3Q9CQ71 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpa3Q9CQ71 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpa3Q9CQ71 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rpa3Q9CQ71 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rpa3Q9CQ71 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.63□□□□□ -0.23
Rpa3Q9CQ71 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpa3Q9CQ71 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpa3Q9CQ71 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpa3Q9CQ71 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpa3Q9CQ71 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Gm29127-201ENSMUST00000188304 517 ntBASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Gm18187-201ENSMUST00000196476 984 ntBASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rpa3Q9CQ71 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Rpa3Q9CQ71 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpa3Q9CQ71 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpa3Q9CQ71 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.61□□□□□ -0.23
Rpa3Q9CQ71 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.61□□□□□ -0.23
Rpa3Q9CQ71 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpa3Q9CQ71 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpa3Q9CQ71 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpa3Q9CQ71 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Rpa3Q9CQ71 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.61□□□□□ -0.23
Rpa3Q9CQ71 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.61□□□□□ -0.23
Rpa3Q9CQ71 Gm15824-201ENSMUST00000119516 955 ntBASIC13.61□□□□□ -0.23
Rpa3Q9CQ71 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Rpa3Q9CQ71 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.61□□□□□ -0.23
Rpa3Q9CQ71 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpa3Q9CQ71 Gm43818-201ENSMUST00000200605 466 ntBASIC13.61□□□□□ -0.23
Rpa3Q9CQ71 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.61□□□□□ -0.23
Rpa3Q9CQ71 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.61□□□□□ -0.23
Rpa3Q9CQ71 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Rpa3Q9CQ71 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpa3Q9CQ71 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpa3Q9CQ71 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpa3Q9CQ71 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.61□□□□□ -0.23
Rpa3Q9CQ71 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rpa3Q9CQ71 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpa3Q9CQ71 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpa3Q9CQ71 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.61□□□□□ -0.23
Rpa3Q9CQ71 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.61□□□□□ -0.23
Rpa3Q9CQ71 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpa3Q9CQ71 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.61□□□□□ -0.23
Rpa3Q9CQ71 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.61□□□□□ -0.23
Rpa3Q9CQ71 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpa3Q9CQ71 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpa3Q9CQ71 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpa3Q9CQ71 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpa3Q9CQ71 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpa3Q9CQ71 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpa3Q9CQ71 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Rpa3Q9CQ71 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Rpa3Q9CQ71 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpa3Q9CQ71 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rpa3Q9CQ71 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpa3Q9CQ71 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.6□□□□□ -0.23
Rpa3Q9CQ71 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.6□□□□□ -0.23
Rpa3Q9CQ71 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms