Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm22331-201ENSMUST00000158066 136 ntBASIC12.56□□□□□ -0.4
Msh4Q99MT2 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Msh4Q99MT2 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msh4Q99MT2 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msh4Q99MT2 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Msh4Q99MT2 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Msh4Q99MT2 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msh4Q99MT2 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msh4Q99MT2 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msh4Q99MT2 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msh4Q99MT2 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msh4Q99MT2 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msh4Q99MT2 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.56□□□□□ -0.4
Msh4Q99MT2 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msh4Q99MT2 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Msh4Q99MT2 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Msh4Q99MT2 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msh4Q99MT2 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Msh4Q99MT2 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msh4Q99MT2 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
Msh4Q99MT2 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msh4Q99MT2 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msh4Q99MT2 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msh4Q99MT2 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msh4Q99MT2 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Msh4Q99MT2 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
Msh4Q99MT2 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msh4Q99MT2 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.55□□□□□ -0.4
Msh4Q99MT2 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.55□□□□□ -0.4
Msh4Q99MT2 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msh4Q99MT2 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.55□□□□□ -0.4
Msh4Q99MT2 Gm29127-201ENSMUST00000188304 517 ntBASIC12.55□□□□□ -0.4
Msh4Q99MT2 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Msh4Q99MT2 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.55□□□□□ -0.4
Msh4Q99MT2 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msh4Q99MT2 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.55□□□□□ -0.4
Msh4Q99MT2 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msh4Q99MT2 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msh4Q99MT2 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.55□□□□□ -0.4
Msh4Q99MT2 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msh4Q99MT2 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Msh4Q99MT2 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msh4Q99MT2 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.55□□□□□ -0.4
Msh4Q99MT2 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msh4Q99MT2 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msh4Q99MT2 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Msh4Q99MT2 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msh4Q99MT2 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.55□□□□□ -0.4
Msh4Q99MT2 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msh4Q99MT2 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msh4Q99MT2 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msh4Q99MT2 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.54□□□□□ -0.4
Msh4Q99MT2 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.54□□□□□ -0.4
Msh4Q99MT2 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msh4Q99MT2 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msh4Q99MT2 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msh4Q99MT2 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msh4Q99MT2 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msh4Q99MT2 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msh4Q99MT2 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msh4Q99MT2 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msh4Q99MT2 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msh4Q99MT2 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msh4Q99MT2 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msh4Q99MT2 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Msh4Q99MT2 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Msh4Q99MT2 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Msh4Q99MT2 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Msh4Q99MT2 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msh4Q99MT2 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.54□□□□□ -0.4
Msh4Q99MT2 Mir1982-201ENSMUST00000157368 74 ntBASIC12.54□□□□□ -0.4
Msh4Q99MT2 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.54□□□□□ -0.4
Msh4Q99MT2 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.54□□□□□ -0.4
Msh4Q99MT2 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Msh4Q99MT2 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.54□□□□□ -0.4
Msh4Q99MT2 Mir7221-201ENSMUST00000184009 72 ntBASIC12.54□□□□□ -0.4
Msh4Q99MT2 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.54□□□□□ -0.4
Msh4Q99MT2 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Msh4Q99MT2 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.54□□□□□ -0.4
Msh4Q99MT2 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Msh4Q99MT2 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.54□□□□□ -0.4
Msh4Q99MT2 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.54□□□□□ -0.4
Msh4Q99MT2 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.54□□□□□ -0.4
Msh4Q99MT2 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.54□□□□□ -0.4
Msh4Q99MT2 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msh4Q99MT2 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msh4Q99MT2 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Msh4Q99MT2 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Msh4Q99MT2 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Msh4Q99MT2 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msh4Q99MT2 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Msh4Q99MT2 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Msh4Q99MT2 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Msh4Q99MT2 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Msh4Q99MT2 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Msh4Q99MT2 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Msh4Q99MT2 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msh4Q99MT2 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Msh4Q99MT2 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Msh4Q99MT2 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms