Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Tlr3Q99MB1 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.83□□□□□ -0.2
Tlr3Q99MB1 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tlr3Q99MB1 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tlr3Q99MB1 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tlr3Q99MB1 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Tlr3Q99MB1 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tlr3Q99MB1 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Tlr3Q99MB1 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.83□□□□□ -0.2
Tlr3Q99MB1 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.83□□□□□ -0.2
Tlr3Q99MB1 Gm26185-201ENSMUST00000157692 266 ntBASIC13.83□□□□□ -0.2
Tlr3Q99MB1 Gm4271-201ENSMUST00000174444 973 ntBASIC13.83□□□□□ -0.2
Tlr3Q99MB1 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Tlr3Q99MB1 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tlr3Q99MB1 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Tlr3Q99MB1 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.83□□□□□ -0.2
Tlr3Q99MB1 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tlr3Q99MB1 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tlr3Q99MB1 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tlr3Q99MB1 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Tlr3Q99MB1 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.83□□□□□ -0.2
Tlr3Q99MB1 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.2
Tlr3Q99MB1 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Tlr3Q99MB1 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Tlr3Q99MB1 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.82□□□□□ -0.2
Tlr3Q99MB1 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.82□□□□□ -0.2
Tlr3Q99MB1 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tlr3Q99MB1 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tlr3Q99MB1 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tlr3Q99MB1 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tlr3Q99MB1 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Tlr3Q99MB1 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tlr3Q99MB1 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.82□□□□□ -0.2
Tlr3Q99MB1 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Tlr3Q99MB1 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.82□□□□□ -0.2
Tlr3Q99MB1 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.82□□□□□ -0.2
Tlr3Q99MB1 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.82□□□□□ -0.2
Tlr3Q99MB1 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tlr3Q99MB1 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.82□□□□□ -0.2
Tlr3Q99MB1 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.82□□□□□ -0.2
Tlr3Q99MB1 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.82□□□□□ -0.2
Tlr3Q99MB1 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tlr3Q99MB1 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tlr3Q99MB1 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tlr3Q99MB1 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tlr3Q99MB1 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Tlr3Q99MB1 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tlr3Q99MB1 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Tlr3Q99MB1 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.82□□□□□ -0.2
Tlr3Q99MB1 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tlr3Q99MB1 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tlr3Q99MB1 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tlr3Q99MB1 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tlr3Q99MB1 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tlr3Q99MB1 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Tlr3Q99MB1 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Tlr3Q99MB1 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tlr3Q99MB1 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tlr3Q99MB1 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tlr3Q99MB1 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.81□□□□□ -0.2
Tlr3Q99MB1 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.81□□□□□ -0.2
Tlr3Q99MB1 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tlr3Q99MB1 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tlr3Q99MB1 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tlr3Q99MB1 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tlr3Q99MB1 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tlr3Q99MB1 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tlr3Q99MB1 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tlr3Q99MB1 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tlr3Q99MB1 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tlr3Q99MB1 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tlr3Q99MB1 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tlr3Q99MB1 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tlr3Q99MB1 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.81□□□□□ -0.2
Tlr3Q99MB1 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tlr3Q99MB1 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Tlr3Q99MB1 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tlr3Q99MB1 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Tlr3Q99MB1 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tlr3Q99MB1 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Tlr3Q99MB1 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tlr3Q99MB1 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.81□□□□□ -0.2
Tlr3Q99MB1 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.81□□□□□ -0.2
Tlr3Q99MB1 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.81□□□□□ -0.2
Tlr3Q99MB1 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.81□□□□□ -0.2
Tlr3Q99MB1 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.81□□□□□ -0.2
Tlr3Q99MB1 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.81□□□□□ -0.2
Tlr3Q99MB1 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.81□□□□□ -0.2
Tlr3Q99MB1 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tlr3Q99MB1 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tlr3Q99MB1 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Tlr3Q99MB1 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Tlr3Q99MB1 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tlr3Q99MB1 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tlr3Q99MB1 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.81□□□□□ -0.2
Tlr3Q99MB1 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tlr3Q99MB1 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.81□□□□□ -0.2
Tlr3Q99MB1 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.81□□□□□ -0.2
Tlr3Q99MB1 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tlr3Q99MB1 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms