Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.32□□□□□ -0.6
Scrt1Q99M85 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Pck2-205ENSMUST00000226352 2784 ntBASIC11.32□□□□□ -0.6
Scrt1Q99M85 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Scrt1Q99M85 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scrt1Q99M85 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scrt1Q99M85 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scrt1Q99M85 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scrt1Q99M85 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scrt1Q99M85 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scrt1Q99M85 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scrt1Q99M85 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scrt1Q99M85 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scrt1Q99M85 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scrt1Q99M85 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Scrt1Q99M85 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Scrt1Q99M85 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Scrt1Q99M85 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Scrt1Q99M85 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scrt1Q99M85 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scrt1Q99M85 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scrt1Q99M85 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Scrt1Q99M85 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.31□□□□□ -0.6
Scrt1Q99M85 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Scrt1Q99M85 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.31□□□□□ -0.6
Scrt1Q99M85 Gm16479-201ENSMUST00000121706 932 ntBASIC11.31□□□□□ -0.6
Scrt1Q99M85 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Scrt1Q99M85 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scrt1Q99M85 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scrt1Q99M85 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scrt1Q99M85 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scrt1Q99M85 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Scrt1Q99M85 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Scrt1Q99M85 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scrt1Q99M85 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Scrt1Q99M85 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Scrt1Q99M85 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scrt1Q99M85 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scrt1Q99M85 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Scrt1Q99M85 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Scrt1Q99M85 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.31□□□□□ -0.6
Scrt1Q99M85 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Scrt1Q99M85 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scrt1Q99M85 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Scrt1Q99M85 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.3□□□□□ -0.6
Scrt1Q99M85 Gm14263-201ENSMUST00000117955 746 ntBASIC11.3□□□□□ -0.6
Scrt1Q99M85 Gm11964-201ENSMUST00000120982 444 ntBASIC11.3□□□□□ -0.6
Scrt1Q99M85 Gm14017-201ENSMUST00000121934 386 ntBASIC11.3□□□□□ -0.6
Scrt1Q99M85 Gm2231-201ENSMUST00000125661 612 ntBASIC11.3□□□□□ -0.6
Scrt1Q99M85 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Gm22334-201ENSMUST00000158070 133 ntBASIC11.3□□□□□ -0.6
Scrt1Q99M85 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Scrt1Q99M85 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.3□□□□□ -0.6
Scrt1Q99M85 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms