Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap3Q99LM2 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.34□□□□□ -0.27
Cdk5rap3Q99LM2 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.34□□□□□ -0.27
Cdk5rap3Q99LM2 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap3Q99LM2 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.34□□□□□ -0.27
Cdk5rap3Q99LM2 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.34□□□□□ -0.27
Cdk5rap3Q99LM2 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.34□□□□□ -0.27
Cdk5rap3Q99LM2 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.34□□□□□ -0.27
Cdk5rap3Q99LM2 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap3Q99LM2 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.34□□□□□ -0.27
Cdk5rap3Q99LM2 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.34□□□□□ -0.27
Cdk5rap3Q99LM2 Gm6458-201ENSMUST00000211573 635 ntBASIC13.34□□□□□ -0.27
Cdk5rap3Q99LM2 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.34□□□□□ -0.27
Cdk5rap3Q99LM2 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.34□□□□□ -0.27
Cdk5rap3Q99LM2 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.34□□□□□ -0.27
Cdk5rap3Q99LM2 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap3Q99LM2 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap3Q99LM2 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap3Q99LM2 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Cdk5rap3Q99LM2 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap3Q99LM2 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap3Q99LM2 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.34□□□□□ -0.27
Cdk5rap3Q99LM2 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap3Q99LM2 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap3Q99LM2 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap3Q99LM2 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap3Q99LM2 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Cdk5rap3Q99LM2 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap3Q99LM2 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk5rap3Q99LM2 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cdk5rap3Q99LM2 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cdk5rap3Q99LM2 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cdk5rap3Q99LM2 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cdk5rap3Q99LM2 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.33□□□□□ -0.27
Cdk5rap3Q99LM2 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cdk5rap3Q99LM2 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk5rap3Q99LM2 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cdk5rap3Q99LM2 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdk5rap3Q99LM2 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdk5rap3Q99LM2 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.32□□□□□ -0.28
Cdk5rap3Q99LM2 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdk5rap3Q99LM2 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdk5rap3Q99LM2 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Cdk5rap3Q99LM2 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdk5rap3Q99LM2 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Cdk5rap3Q99LM2 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdk5rap3Q99LM2 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.32□□□□□ -0.28
Cdk5rap3Q99LM2 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdk5rap3Q99LM2 Gm6152-201ENSMUST00000151704 340 ntBASIC13.32□□□□□ -0.28
Cdk5rap3Q99LM2 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.32□□□□□ -0.28
Cdk5rap3Q99LM2 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.32□□□□□ -0.28
Cdk5rap3Q99LM2 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdk5rap3Q99LM2 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.32□□□□□ -0.28
Cdk5rap3Q99LM2 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdk5rap3Q99LM2 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.32□□□□□ -0.28
Cdk5rap3Q99LM2 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cdk5rap3Q99LM2 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdk5rap3Q99LM2 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdk5rap3Q99LM2 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdk5rap3Q99LM2 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms