Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lims1Q99JW4 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.74□□□□□ -0.53
Lims1Q99JW4 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.74□□□□□ -0.53
Lims1Q99JW4 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.74□□□□□ -0.53
Lims1Q99JW4 Gm6458-201ENSMUST00000211573 635 ntBASIC11.74□□□□□ -0.53
Lims1Q99JW4 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.74□□□□□ -0.53
Lims1Q99JW4 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.74□□□□□ -0.53
Lims1Q99JW4 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lims1Q99JW4 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Lims1Q99JW4 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lims1Q99JW4 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lims1Q99JW4 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lims1Q99JW4 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lims1Q99JW4 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lims1Q99JW4 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.74□□□□□ -0.53
Lims1Q99JW4 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.74□□□□□ -0.53
Lims1Q99JW4 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Lims1Q99JW4 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.74□□□□□ -0.53
Lims1Q99JW4 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.74□□□□□ -0.53
Lims1Q99JW4 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lims1Q99JW4 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lims1Q99JW4 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lims1Q99JW4 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lims1Q99JW4 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lims1Q99JW4 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lims1Q99JW4 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lims1Q99JW4 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lims1Q99JW4 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lims1Q99JW4 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.74□□□□□ -0.53
Lims1Q99JW4 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lims1Q99JW4 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lims1Q99JW4 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lims1Q99JW4 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lims1Q99JW4 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lims1Q99JW4 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lims1Q99JW4 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lims1Q99JW4 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lims1Q99JW4 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lims1Q99JW4 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lims1Q99JW4 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.73□□□□□ -0.53
Lims1Q99JW4 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lims1Q99JW4 Gm14127-201ENSMUST00000117906 678 ntBASIC11.73□□□□□ -0.53
Lims1Q99JW4 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lims1Q99JW4 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lims1Q99JW4 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lims1Q99JW4 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lims1Q99JW4 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lims1Q99JW4 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lims1Q99JW4 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Lims1Q99JW4 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lims1Q99JW4 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Lims1Q99JW4 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lims1Q99JW4 Gm27390-201ENSMUST00000184516 176 ntBASIC11.73□□□□□ -0.53
Lims1Q99JW4 Gm28693-202ENSMUST00000190758 331 ntBASIC11.73□□□□□ -0.53
Lims1Q99JW4 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.73□□□□□ -0.53
Lims1Q99JW4 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.73□□□□□ -0.53
Lims1Q99JW4 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Lims1Q99JW4 Gm44855-201ENSMUST00000205725 362 ntBASIC11.73□□□□□ -0.53
Lims1Q99JW4 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Lims1Q99JW4 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lims1Q99JW4 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lims1Q99JW4 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.73□□□□□ -0.53
Lims1Q99JW4 AC153937.1-201ENSMUST00000218734 412 ntBASIC11.73□□□□□ -0.53
Lims1Q99JW4 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lims1Q99JW4 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.73□□□□□ -0.53
Lims1Q99JW4 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lims1Q99JW4 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Lims1Q99JW4 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Lims1Q99JW4 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lims1Q99JW4 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lims1Q99JW4 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lims1Q99JW4 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Lims1Q99JW4 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lims1Q99JW4 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lims1Q99JW4 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Lims1Q99JW4 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lims1Q99JW4 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lims1Q99JW4 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lims1Q99JW4 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lims1Q99JW4 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lims1Q99JW4 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lims1Q99JW4 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lims1Q99JW4 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lims1Q99JW4 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lims1Q99JW4 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lims1Q99JW4 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lims1Q99JW4 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lims1Q99JW4 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.72□□□□□ -0.53
Lims1Q99JW4 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lims1Q99JW4 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lims1Q99JW4 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.72□□□□□ -0.53
Lims1Q99JW4 Gm15429-201ENSMUST00000151268 798 ntBASIC11.72□□□□□ -0.53
Lims1Q99JW4 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.72□□□□□ -0.53
Lims1Q99JW4 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lims1Q99JW4 Gm19184-201ENSMUST00000196798 928 ntBASIC11.72□□□□□ -0.53
Lims1Q99JW4 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.72□□□□□ -0.53
Lims1Q99JW4 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lims1Q99JW4 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lims1Q99JW4 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lims1Q99JW4 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms