Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Smc1bQ920F6 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC14.88□□□□□ -0.03
Smc1bQ920F6 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.88□□□□□ -0.03
Smc1bQ920F6 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.88□□□□□ -0.03
Smc1bQ920F6 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Smc1bQ920F6 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Smc1bQ920F6 Gm9445-201ENSMUST00000207454 1285 ntBASIC14.88□□□□□ -0.03
Smc1bQ920F6 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.88□□□□□ -0.03
Smc1bQ920F6 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC14.88□□□□□ -0.03
Smc1bQ920F6 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14.88□□□□□ -0.03
Smc1bQ920F6 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.88□□□□□ -0.03
Smc1bQ920F6 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smc1bQ920F6 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smc1bQ920F6 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smc1bQ920F6 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smc1bQ920F6 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smc1bQ920F6 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.88□□□□□ -0.03
Smc1bQ920F6 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.88□□□□□ -0.03
Smc1bQ920F6 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smc1bQ920F6 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Smc1bQ920F6 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Smc1bQ920F6 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smc1bQ920F6 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smc1bQ920F6 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Smc1bQ920F6 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smc1bQ920F6 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Smc1bQ920F6 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1bQ920F6 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Smc1bQ920F6 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1bQ920F6 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1bQ920F6 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1bQ920F6 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Smc1bQ920F6 Gm11222-201ENSMUST00000119005 738 ntBASIC14.87□□□□□ -0.03
Smc1bQ920F6 Gm13123-201ENSMUST00000122173 492 ntBASIC14.87□□□□□ -0.03
Smc1bQ920F6 Gm2231-201ENSMUST00000125661 612 ntBASIC14.87□□□□□ -0.03
Smc1bQ920F6 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC14.87□□□□□ -0.03
Smc1bQ920F6 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Smc1bQ920F6 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC14.87□□□□□ -0.03
Smc1bQ920F6 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Smc1bQ920F6 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Smc1bQ920F6 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.87□□□□□ -0.03
Smc1bQ920F6 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.87□□□□□ -0.03
Smc1bQ920F6 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1bQ920F6 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1bQ920F6 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1bQ920F6 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1bQ920F6 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1bQ920F6 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1bQ920F6 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.87□□□□□ -0.03
Smc1bQ920F6 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1bQ920F6 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1bQ920F6 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1bQ920F6 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Smc1bQ920F6 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1bQ920F6 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1bQ920F6 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc1bQ920F6 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
Smc1bQ920F6 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smc1bQ920F6 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smc1bQ920F6 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Smc1bQ920F6 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smc1bQ920F6 Gm6015-201ENSMUST00000217493 1586 ntBASIC14.86□□□□□ -0.03
Smc1bQ920F6 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smc1bQ920F6 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.86□□□□□ -0.03
Smc1bQ920F6 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smc1bQ920F6 Gm2606-201ENSMUST00000100754 1002 ntBASIC14.86□□□□□ -0.03
Smc1bQ920F6 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.86□□□□□ -0.03
Smc1bQ920F6 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.86□□□□□ -0.03
Smc1bQ920F6 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.86□□□□□ -0.03
Smc1bQ920F6 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.86□□□□□ -0.03
Smc1bQ920F6 Gm11964-201ENSMUST00000120982 444 ntBASIC14.86□□□□□ -0.03
Smc1bQ920F6 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.86□□□□□ -0.03
Smc1bQ920F6 Gm7809-201ENSMUST00000153199 742 ntBASIC14.86□□□□□ -0.03
Smc1bQ920F6 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.86□□□□□ -0.03
Smc1bQ920F6 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.86□□□□□ -0.03
Smc1bQ920F6 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.86□□□□□ -0.03
Smc1bQ920F6 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smc1bQ920F6 Gm7293-201ENSMUST00000216682 1007 ntBASIC14.86□□□□□ -0.03
Smc1bQ920F6 CT025533.2-201ENSMUST00000228715 1248 ntBASIC14.86□□□□□ -0.03
Smc1bQ920F6 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smc1bQ920F6 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smc1bQ920F6 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smc1bQ920F6 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smc1bQ920F6 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Smc1bQ920F6 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smc1bQ920F6 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smc1bQ920F6 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smc1bQ920F6 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smc1bQ920F6 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Smc1bQ920F6 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smc1bQ920F6 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smc1bQ920F6 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Smc1bQ920F6 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smc1bQ920F6 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smc1bQ920F6 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
Smc1bQ920F6 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smc1bQ920F6 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc1bQ920F6 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc1bQ920F6 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc1bQ920F6 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms