Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb3Q91XZ7 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb3Q91XZ7 Gm7488-201ENSMUST00000117148 684 ntBASIC13.02□□□□□ -0.33
Pcdhb3Q91XZ7 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.02□□□□□ -0.33
Pcdhb3Q91XZ7 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.02□□□□□ -0.33
Pcdhb3Q91XZ7 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb3Q91XZ7 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb3Q91XZ7 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdhb3Q91XZ7 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb3Q91XZ7 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Pcdhb3Q91XZ7 Gm25025-201ENSMUST00000175018 111 ntBASIC13.02□□□□□ -0.33
Pcdhb3Q91XZ7 Gm24694-201ENSMUST00000180054 110 ntBASIC13.02□□□□□ -0.33
Pcdhb3Q91XZ7 Gm27663-201ENSMUST00000184839 110 ntBASIC13.02□□□□□ -0.33
Pcdhb3Q91XZ7 Gm33320-201ENSMUST00000192232 530 ntBASIC13.02□□□□□ -0.33
Pcdhb3Q91XZ7 Gm43244-201ENSMUST00000196994 1285 ntBASIC13.02□□□□□ -0.33
Pcdhb3Q91XZ7 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pcdhb3Q91XZ7 Gm5186-201ENSMUST00000218781 920 ntBASIC13.02□□□□□ -0.33
Pcdhb3Q91XZ7 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.02□□□□□ -0.33
Pcdhb3Q91XZ7 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb3Q91XZ7 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pcdhb3Q91XZ7 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb3Q91XZ7 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb3Q91XZ7 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb3Q91XZ7 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb3Q91XZ7 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.02□□□□□ -0.33
Pcdhb3Q91XZ7 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdhb3Q91XZ7 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb3Q91XZ7 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb3Q91XZ7 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb3Q91XZ7 Gm43980-201ENSMUST00000204899 1612 ntBASIC13.02□□□□□ -0.33
Pcdhb3Q91XZ7 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb3Q91XZ7 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb3Q91XZ7 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb3Q91XZ7 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb3Q91XZ7 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb3Q91XZ7 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb3Q91XZ7 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb3Q91XZ7 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.01□□□□□ -0.33
Pcdhb3Q91XZ7 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb3Q91XZ7 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb3Q91XZ7 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhb3Q91XZ7 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb3Q91XZ7 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb3Q91XZ7 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb3Q91XZ7 Gm14435-201ENSMUST00000108995 643 ntAPPRIS P5 TSL 2 BASIC13.01□□□□□ -0.33
Pcdhb3Q91XZ7 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.01□□□□□ -0.33
Pcdhb3Q91XZ7 Gm16215-201ENSMUST00000161990 637 ntBASIC13.01□□□□□ -0.33
Pcdhb3Q91XZ7 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Pcdhb3Q91XZ7 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb3Q91XZ7 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.01□□□□□ -0.33
Pcdhb3Q91XZ7 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.01□□□□□ -0.33
Pcdhb3Q91XZ7 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb3Q91XZ7 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC13.01□□□□□ -0.33
Pcdhb3Q91XZ7 Ighv10-4-201ENSMUST00000193702 299 ntBASIC13.01□□□□□ -0.33
Pcdhb3Q91XZ7 Gm38247-201ENSMUST00000194675 433 ntBASIC13.01□□□□□ -0.33
Pcdhb3Q91XZ7 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pcdhb3Q91XZ7 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb3Q91XZ7 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdhb3Q91XZ7 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb3Q91XZ7 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb3Q91XZ7 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb3Q91XZ7 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb3Q91XZ7 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb3Q91XZ7 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb3Q91XZ7 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb3Q91XZ7 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb3Q91XZ7 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdhb3Q91XZ7 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Gm15321-201ENSMUST00000121290 288 ntBASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Gm43703-201ENSMUST00000200523 763 ntBASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Gm6916-202ENSMUST00000205523 195 ntBASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Gm18027-201ENSMUST00000218947 619 ntBASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 AC149294.4-201ENSMUST00000227870 882 ntBASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb3Q91XZ7 Snapc5-201ENSMUST00000034965 1228 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms