Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb4Q91XZ6 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb4Q91XZ6 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb4Q91XZ6 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb4Q91XZ6 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pcdhb4Q91XZ6 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pcdhb4Q91XZ6 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb4Q91XZ6 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb4Q91XZ6 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.83□□□□□ -0.36
Pcdhb4Q91XZ6 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb4Q91XZ6 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb4Q91XZ6 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.83□□□□□ -0.36
Pcdhb4Q91XZ6 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Pcdhb4Q91XZ6 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb4Q91XZ6 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Gm15429-201ENSMUST00000151268 798 ntBASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Gm5866-201ENSMUST00000177881 973 ntBASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Itm2b-204ENSMUST00000228637 783 ntBASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Gm15823-201ENSMUST00000064305 670 ntBASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms