Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb6Q91XZ4 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb6Q91XZ4 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb6Q91XZ4 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Pcdhb6Q91XZ4 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.22□□□□□ -0.29
Pcdhb6Q91XZ4 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb6Q91XZ4 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.22□□□□□ -0.29
Pcdhb6Q91XZ4 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb6Q91XZ4 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.22□□□□□ -0.29
Pcdhb6Q91XZ4 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.22□□□□□ -0.29
Pcdhb6Q91XZ4 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb6Q91XZ4 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Pcdhb6Q91XZ4 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Pcdhb6Q91XZ4 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb6Q91XZ4 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Pcdhb6Q91XZ4 Gm11424-201ENSMUST00000121929 829 ntBASIC13.22□□□□□ -0.29
Pcdhb6Q91XZ4 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.22□□□□□ -0.29
Pcdhb6Q91XZ4 Gm23363-201ENSMUST00000175024 79 ntBASIC13.22□□□□□ -0.29
Pcdhb6Q91XZ4 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb6Q91XZ4 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb6Q91XZ4 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Pcdhb6Q91XZ4 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb6Q91XZ4 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb6Q91XZ4 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb6Q91XZ4 Gm19163-201ENSMUST00000223313 780 ntBASIC13.22□□□□□ -0.29
Pcdhb6Q91XZ4 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb6Q91XZ4 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb6Q91XZ4 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb6Q91XZ4 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Pcdhb6Q91XZ4 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb6Q91XZ4 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb6Q91XZ4 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.22□□□□□ -0.29
Pcdhb6Q91XZ4 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb6Q91XZ4 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Pcdhb6Q91XZ4 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb6Q91XZ4 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb6Q91XZ4 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.22□□□□□ -0.29
Pcdhb6Q91XZ4 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb6Q91XZ4 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb6Q91XZ4 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Pcdhb6Q91XZ4 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb6Q91XZ4 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb6Q91XZ4 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb6Q91XZ4 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb6Q91XZ4 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb6Q91XZ4 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb6Q91XZ4 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb6Q91XZ4 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb6Q91XZ4 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb6Q91XZ4 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb6Q91XZ4 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb6Q91XZ4 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb6Q91XZ4 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.21□□□□□ -0.29
Pcdhb6Q91XZ4 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb6Q91XZ4 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb6Q91XZ4 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Pcdhb6Q91XZ4 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Pcdhb6Q91XZ4 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb6Q91XZ4 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb6Q91XZ4 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb6Q91XZ4 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb6Q91XZ4 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.21□□□□□ -0.29
Pcdhb6Q91XZ4 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb6Q91XZ4 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Pcdhb6Q91XZ4 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb6Q91XZ4 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb6Q91XZ4 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdhb6Q91XZ4 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdhb6Q91XZ4 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdhb6Q91XZ4 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdhb6Q91XZ4 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdhb6Q91XZ4 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb6Q91XZ4 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Pcdhb6Q91XZ4 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.2□□□□□ -0.3
Pcdhb6Q91XZ4 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb6Q91XZ4 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb6Q91XZ4 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.2□□□□□ -0.3
Pcdhb6Q91XZ4 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Pcdhb6Q91XZ4 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb6Q91XZ4 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb6Q91XZ4 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb6Q91XZ4 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb6Q91XZ4 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.2□□□□□ -0.3
Pcdhb6Q91XZ4 Gm12390-201ENSMUST00000117897 397 ntBASIC13.2□□□□□ -0.3
Pcdhb6Q91XZ4 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.2□□□□□ -0.3
Pcdhb6Q91XZ4 Gm17150-201ENSMUST00000165577 381 ntBASIC13.2□□□□□ -0.3
Pcdhb6Q91XZ4 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb6Q91XZ4 Gm27682-201ENSMUST00000183930 110 ntBASIC13.2□□□□□ -0.3
Pcdhb6Q91XZ4 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.2□□□□□ -0.3
Pcdhb6Q91XZ4 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb6Q91XZ4 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb6Q91XZ4 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb6Q91XZ4 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb6Q91XZ4 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.2□□□□□ -0.3
Pcdhb6Q91XZ4 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb6Q91XZ4 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb6Q91XZ4 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb6Q91XZ4 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb6Q91XZ4 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms