Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Gm5687-201ENSMUST00000118252 640 ntBASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Gm6180-201ENSMUST00000065243 498 ntBASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga3Q91XY5 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 Gm12928-201ENSMUST00000117115 573 ntBASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 Gm6447-201ENSMUST00000118905 835 ntBASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 Gm2495-201ENSMUST00000191160 466 ntBASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 Gm19931-201ENSMUST00000198920 368 ntBASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 Gm18473-201ENSMUST00000220543 868 ntBASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Pcdhga3Q91XY5 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.49□□□□□ -0.57
Pcdhga3Q91XY5 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdhga3Q91XY5 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdhga3Q91XY5 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdhga3Q91XY5 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Pcdhga3Q91XY5 Matn2-203ENSMUST00000226766 3252 ntBASIC11.49□□□□□ -0.57
Pcdhga3Q91XY5 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdhga3Q91XY5 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.49□□□□□ -0.57
Pcdhga3Q91XY5 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.49□□□□□ -0.57
Pcdhga3Q91XY5 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Pcdhga3Q91XY5 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Pcdhga3Q91XY5 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdhga3Q91XY5 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.49□□□□□ -0.57
Pcdhga3Q91XY5 Gm11918-201ENSMUST00000121660 179 ntBASIC11.49□□□□□ -0.57
Pcdhga3Q91XY5 Gm6152-201ENSMUST00000151704 340 ntBASIC11.49□□□□□ -0.57
Pcdhga3Q91XY5 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdhga3Q91XY5 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdhga3Q91XY5 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Pcdhga3Q91XY5 Gm6745-201ENSMUST00000199216 526 ntBASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms