Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx1Q91V10 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx1Q91V10 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx1Q91V10 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx1Q91V10 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx1Q91V10 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx1Q91V10 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx1Q91V10 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx1Q91V10 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Vsx1Q91V10 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx1Q91V10 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx1Q91V10 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx1Q91V10 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.74□□□□□ -0.37
Vsx1Q91V10 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.74□□□□□ -0.37
Vsx1Q91V10 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Vsx1Q91V10 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.74□□□□□ -0.37
Vsx1Q91V10 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx1Q91V10 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Vsx1Q91V10 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx1Q91V10 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx1Q91V10 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx1Q91V10 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx1Q91V10 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx1Q91V10 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx1Q91V10 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx1Q91V10 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx1Q91V10 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx1Q91V10 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx1Q91V10 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx1Q91V10 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx1Q91V10 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Vsx1Q91V10 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Vsx1Q91V10 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx1Q91V10 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Vsx1Q91V10 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx1Q91V10 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx1Q91V10 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.73□□□□□ -0.37
Vsx1Q91V10 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Gm13875-201ENSMUST00000120162 282 ntBASIC12.73□□□□□ -0.37
Vsx1Q91V10 Gm8566-201ENSMUST00000120174 465 ntBASIC12.73□□□□□ -0.37
Vsx1Q91V10 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Gm27046-201ENSMUST00000182160 463 ntBASIC12.73□□□□□ -0.37
Vsx1Q91V10 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.73□□□□□ -0.37
Vsx1Q91V10 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx1Q91V10 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx1Q91V10 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx1Q91V10 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Vsx1Q91V10 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vsx1Q91V10 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.72□□□□□ -0.37
Vsx1Q91V10 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vsx1Q91V10 Rubie-203ENSMUST00000227803 2430 ntBASIC12.72□□□□□ -0.37
Vsx1Q91V10 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vsx1Q91V10 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.72□□□□□ -0.37
Vsx1Q91V10 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vsx1Q91V10 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vsx1Q91V10 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vsx1Q91V10 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vsx1Q91V10 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vsx1Q91V10 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vsx1Q91V10 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vsx1Q91V10 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vsx1Q91V10 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Vsx1Q91V10 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms