Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retreg1dQ8VE91 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retreg1dQ8VE91 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retreg1dQ8VE91 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retreg1dQ8VE91 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retreg1dQ8VE91 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Retreg1dQ8VE91 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retreg1dQ8VE91 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retreg1dQ8VE91 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retreg1dQ8VE91 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.8□□□□□ -0.36
Retreg1dQ8VE91 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Retreg1dQ8VE91 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.8□□□□□ -0.36
Retreg1dQ8VE91 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retreg1dQ8VE91 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retreg1dQ8VE91 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 Mir686-201ENSMUST00000102174 109 ntBASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg1dQ8VE91 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Gm7029-201ENSMUST00000173226 450 ntBASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Gm37008-201ENSMUST00000195712 319 ntBASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Gm19184-201ENSMUST00000196798 928 ntBASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Gm9823-201ENSMUST00000051212 327 ntBASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.78□□□□□ -0.36
Retreg1dQ8VE91 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms